PKS:AO090023000877
From Metabolomics.JP
(Difference between revisions)
m (moved PKS:AOry13 to PKS:AO090023000877) |
|||
| (3 intermediate revisions by one user not shown) | |||
| Line 11: | Line 11: | ||
|MAPSI=KS-AT-ACP | |MAPSI=KS-AT-ACP | ||
|CDD=KS-(AT)-(DH)-PP-TE | |CDD=KS-(AT)-(DH)-PP-TE | ||
| + | |ITERDB=KS-AT-DH-ACP-ACP-CYC | ||
| + | |InferredDomain=SAT(?)-KS-AT-DH-Core(?)ACP-TE | ||
|class=PRPKS | |class=PRPKS | ||
|reliability=putative | |reliability=putative | ||
|description=hypothetical protein [Aspergillus oryzae RIB40] | |description=hypothetical protein [Aspergillus oryzae RIB40] | ||
| − | |information= | + | |information=This sequence has been updated ([http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=protein&term=XP_001821376.2 XP_001821376.2]). Previous version is XP_001821376(length= 2135 aa). AT and DH domain from CDD identification of XP_001821376.2 are incomplete domains. |
| − | |length= | + | |length=1895 |
| + | |references=\*Ahuja.+2012$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 03:13, 18 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus oryzae RIB40 (GenBank XP_001821376) all species | |||
|---|---|---|---|
| Class | PRPKS (length: 1895) all classes Class 18.NRPKS_II in KS domain phylogeny | Reliability | putative |
| Product | GeneName | ||
| UniProt,UniRef90 | - , - | UniRef50 | - |
| Domain by MAPSI | KS-AT-ACP | ||
| Domain by CDD | KS-(AT)-(DH)-PP-TE | ||
| Domain by ITER-DB | KS-AT-DH-ACP-ACP-CYC | ||
| Estimated Domain | SAT(?)-KS-AT-DH-Core(?)ACP-TE | ||
| Description | hypothetical protein [Aspergillus oryzae RIB40] | ||
| Information | This sequence has been updated (XP_001821376.2). Previous version is XP_001821376(length= 2135 aa). AT and DH domain from CDD identification of XP_001821376.2 are incomplete domains. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
