PKS:AN7909

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|species=Aspergillus nidulans FGSC A4
 
|species=Aspergillus nidulans FGSC A4
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
|product=orsellinic acid (sterigmatocystin)
+
|product=Orsellinic acid(sterigmatocystin)/F9975/violaceols
 
|GenBank=XP_681178
 
|GenBank=XP_681178
 
|UniProt=C8V4V0
 
|UniProt=C8V4V0
 
|UniRef90=C8V4V0
 
|UniRef90=C8V4V0
 
|UniRef50=C8V4V0
 
|UniRef50=C8V4V0
|geneName=
+
|geneName=orsA
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|MAPSI=KS-AT-ACP-ACP-CYC
|CDD=KS-AT-DH-PP-PP-TE
+
|CDD=KS-AT-(DH)-PP-PP-(TE)
|class=RPKS
+
|ITERDB=KS-AT-ACP-ACP-CYC
 +
|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE
 +
|class=NRPKS
 
|reliability=
 
|reliability=
 
|description=hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4]
|information=
+
|information=ANIA07909 is possibly classified into NRPKS.Because it's DH domain is incomplete and short( 77 aa). Although it contains DH domain, it might belong NRPKS. Predicted cluster size: 5 genes.
 
|length=2103
 
|length=2103
|references=\*Li.+2010$
+
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 15:35, 26 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_681178) all species
Class NRPKS (length: 2103) all classes   Class in KS domain phylogeny Reliability
Product Orsellinic acid(sterigmatocystin)/F9975/violaceols GeneName orsA
UniProt,UniRef90 C8V4V0 , C8V4V0 UniRef50 C8V4V0
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-(DH)-PP-PP-(TE)

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ACP-TE
Description hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4]
Information ANIA07909 is possibly classified into NRPKS.Because it's DH domain is incomplete and short( 77 aa). Although it contains DH domain, it might belong NRPKS. Predicted cluster size: 5 genes.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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