Help:Contents
From Metabolomics.JP
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− | {{#DEF:NumberOfDataPages|{{#expr:{{#countTitle:^_ | + | {{#DEF:NumberOfDataPages|{{#expr:{{#countTitle:^_*}} + {{#countTitle:^_*|Species}} + {{#countTitle:^_*|Category}} + {{#countTitle:^_*|Reference}} }} }} |
− | == How to Cite Us == | + | =={{Bilingual|このサイトについて|About Us}}== |
+ | |||
+ | {{Twocolumn| | ||
+ | This site is created, edited, and maintained by Arita Laboratory, National Institute of Genetics. | ||
+ | Descriptions on this website are, if not otherwise specified, written by Masanori Arita. | ||
+ | | | ||
+ | このサイトは国立遺伝学研究所の有田研究室によって開設、編集、運営されています。 | ||
+ | このサイト内の記述は、そうでないと明記されない限り、有田正規が執筆しています(文責)。 | ||
+ | }} | ||
+ | |||
+ | =={{Bilingual|引用のしかた|How to Cite Us}}== | ||
{{Twocolumn| | {{Twocolumn| | ||
− | If you are interested in our | + | If you are interested in our Wiki-based database (including ''persist'' and ''volatile'' functions), please read [http://www.biodatamining.org/content/1/1/7 our paper in ''BioData Mining'']. You may link to our contents freely. |
| | | | ||
− | データ管理方法(Wikiを用いたデータベース一般)に興味のある方は、以下のBioData | + | データ管理方法(Wikiを用いたデータベース一般)に興味のある方は、以下のBioData Mining誌をご覧ください。リンクは自由におこなってください。 |
}} | }} | ||
− | ===About this database=== | + | ==={{Bilingual|データベースについて|About this database}}=== |
* Arita M., Suwa K. [http://www.biodatamining.org/content/1/1/7/ "Search Extension Transforms Wiki into a Relational System: a case for flavonoid metabolite database", ''BioData Mining'' 1:7, 2008] | * Arita M., Suwa K. [http://www.biodatamining.org/content/1/1/7/ "Search Extension Transforms Wiki into a Relational System: a case for flavonoid metabolite database", ''BioData Mining'' 1:7, 2008] | ||
− | ===About Flavonoid classification=== | + | ==={{Bilingual|フラボノイド分類について|About Flavonoid classification}}=== |
* Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." ''Saibou Kougaku (in Japanese)'', 25(12):1388-1393, 2006 | * Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." ''Saibou Kougaku (in Japanese)'', 25(12):1388-1393, 2006 | ||
* Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" ''Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19)'', Singapore, 3-14, 2007 [PMID 18546500] | * Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" ''Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19)'', Singapore, 3-14, 2007 [PMID 18546500] | ||
− | == | + | =={{Bilingual|スタッフ|Staff}}== |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | ===Past=== | + | * Masanori Arita Ph.D (principal investigator) |
+ | |||
+ | |||
+ | ==={{Bilingual|過去|Past}}=== | ||
+ | * Kazuhiro Suwa | ||
+ | * Miwa Yoshimoto | ||
* Toshiaki Tokimatsu, Ph.D | * Toshiaki Tokimatsu, Ph.D | ||
* Yukiko Nakanishi | * Yukiko Nakanishi | ||
* Yukiko Fujiwara | * Yukiko Fujiwara | ||
+ | * Tadashi Gambe | ||
+ | =={{Bilingual|研究助成|Funding}}== | ||
+ | * Grant-in-Aid for Scientific Research on Priority Areas "Systems Genomics" from Ministry of Education, Culture, Sports, Science and Technology, Japan (文部科学省科研費補助金 特定領域研究ゲノム「システム生命情報」 | ||
+ | * Institute for Bioinformatics Research and Development, Japan Science and Technology Agency, Japan (JST-BIRD) | ||
+ | * Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Japan (JSTさきがけ [http://www.jst.go.jp/kisoken/presto/ja/kenkyu/simulation.html シミュレーション技術の革新と実用化基盤の構築]) | ||
− | == System Organization | + | =={{Bilingual|システム構成|System Organization}}== |
{{twocolumn| | {{twocolumn| | ||
This site is build on [http://www.mediawiki.org/ MediaWiki]. Total number of data pages is {{#VAR:NumberOfDataPages}}. | This site is build on [http://www.mediawiki.org/ MediaWiki]. Total number of data pages is {{#VAR:NumberOfDataPages}}. | ||
* [[Special:Statistics|Statistics]] | * [[Special:Statistics|Statistics]] | ||
* [[Doc:Extensions|Site specific extensions]] | * [[Doc:Extensions|Site specific extensions]] | ||
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このサイトは [http://www.mediawiki.org/ MediaWiki] というシステム上に | このサイトは [http://www.mediawiki.org/ MediaWiki] というシステム上に | ||
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* [[Special:Statistics|ページ統計]] | * [[Special:Statistics|ページ統計]] | ||
* [[Doc:Extensions|サイト独自の機能拡張]] | * [[Doc:Extensions|サイト独自の機能拡張]] | ||
− | |||
}} | }} | ||
− | ==For Administrators== | + | ==={{Bilingual|ソースコード| Source code of our site specific extensions}}=== |
+ | * [[Help:Extension/Volatile|Volatile namespace]] | ||
+ | * [[Help:Extension/Persistency|Persist namespace]] | ||
+ | * [[Help:Extension/HTMLForm|Form tag in HTML]] | ||
+ | * [[Help:Extension/Wbr|Wbr tag in HTML]] | ||
+ | * [[Help:Extension/MySQLLikeSearch|SQL-like search]] | ||
+ | * [[Help:Extension/ExtendedFunctions|String functions]] | ||
+ | * [[Help:Extension/ScriptFunctions|Calling Lua program]] | ||
+ | * [[Help:Extension/MolFunctions|MOL-format file functions]] | ||
+ | * [[Help:Extension/CreateGraph|Graph drawing]] | ||
+ | |||
+ | |||
+ | =={{Bilingual|管理者用|For Administrators}}== | ||
* [[Help:Maintenance| Maintenance page]] | * [[Help:Maintenance| Maintenance page]] | ||
+ | * [http://metabolomics.jp/awstats/awstats.pl?config=metabolomics.jp Access Statistics] |
Latest revision as of 10:22, 22 February 2017
Contents |
[edit] About Us
This site is created, edited, and maintained by Arita Laboratory, National Institute of Genetics. Descriptions on this website are, if not otherwise specified, written by Masanori Arita.
[edit] How to Cite Us
If you are interested in our Wiki-based database (including persist and volatile functions), please read our paper in BioData Mining. You may link to our contents freely.
[edit] About this database
- Arita M., Suwa K. "Search Extension Transforms Wiki into a Relational System: a case for flavonoid metabolite database", BioData Mining 1:7, 2008
[edit] About Flavonoid classification
- Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." Saibou Kougaku (in Japanese), 25(12):1388-1393, 2006
- Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19), Singapore, 3-14, 2007 [PMID 18546500]
[edit] Staff
- Masanori Arita Ph.D (principal investigator)
[edit] Past
- Kazuhiro Suwa
- Miwa Yoshimoto
- Toshiaki Tokimatsu, Ph.D
- Yukiko Nakanishi
- Yukiko Fujiwara
- Tadashi Gambe
[edit] Funding
- Grant-in-Aid for Scientific Research on Priority Areas "Systems Genomics" from Ministry of Education, Culture, Sports, Science and Technology, Japan (文部科学省科研費補助金 特定領域研究ゲノム「システム生命情報」
- Institute for Bioinformatics Research and Development, Japan Science and Technology Agency, Japan (JST-BIRD)
- Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Japan (JSTさきがけ シミュレーション技術の革新と実用化基盤の構築)
[edit] System Organization
This site is build on MediaWiki. Total number of data pages is 20719.
[edit] Source code of our site specific extensions
- Volatile namespace
- Persist namespace
- Form tag in HTML
- Wbr tag in HTML
- SQL-like search
- String functions
- Calling Lua program
- MOL-format file functions
- Graph drawing