BM All
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==Category description== | ==Category description== | ||
This page introduces a hierarchical classification of basic metabolites. | This page introduces a hierarchical classification of basic metabolites. | ||
| + | <br> | ||
| + | Class Description | ||
| + | {{ClassifiedTable|1= | ||
| + | BMIO && Inorganic Chemcals && Metals, Halogens, Nitrogen, Sulfur, Phosphorus compounds | ||
| + | && BMAA && Amino acids && Basic amino acids(composing protein), their modified form(excluding carbon chain modification) and their isomeric form | ||
| + | && BMAD && Amino acids derivatives && Amino acids(excluding basic a.a.), Basic a.a. with additional carbon chain and Peptides | ||
| + | && BMFY && Fatty Acyl and Related Molecules && Carboxylic acid, Aldehyde, Alcohol, Amine, Phosphate, Sulfate and so on | ||
| + | && BMMC && mono-cyclic or asssembled cyclic molecules && benzene, pyrimidine, pyridine, imidazole, thiazole, quinone, retinol, pyrrolidin, lacton, aliphatic cyclic, hetero cyclic, asembled | ||
| + | && BMCC && conjugated cyclic molecules && purine, pteridine, porphyrin, indole, tocopherol, quinoline, naphthalen, condensed ring, bridged structure | ||
| + | && BMxx && others && other metabolite related molecules | ||
| + | }} | ||
| + | |||
| + | Basic metabolites ID list | ||
{{ClassifiedTable|1= | {{ClassifiedTable|1= | ||
| − | + | BMIO && BMIOOX && oxidized elements &&&& BMIOMT && metals and halogens (and other atomic elements) && | |
| − | + | && BMIONT && nitrogen compounds && | |
| − | && BMIOOX && oxidized elements && | + | && BMIOPP && phosphates && |
| − | && BMIOMT && metals and halogens (and other atomic elements) && | + | && BMIOSF && sulfates && |
| − | && BMIONT && nitrogen compounds && | + | BMAA && BMAASn && straight-chain amino acids(with carbon chain length:n) && |
| − | && BMIOPP && phosphates && | + | && BMAABn && branched-chain amino acids(with carbon chain length:n) && |
| − | && BMIOSF && sulfates && | + | && BMAACC && cyclic and aromatic amino acids && |
| − | && | + | && BMAACCBZ && cyclic and aromatic amino acids with benzene ring && |
| − | && | + | && BMAACCID && cyclic and aromatic amino acids with indole ring && |
| − | && | + | && BMAACCPL && cyclic and aromatic amino acids with pyrrolidine ring && |
| − | && | + | && BMAACCIZ && cyclic and aromatic amino acids with imidazole ring && |
| − | && | + | BMAD && BMADSn && straight-chain amino acid derivatives(with carbon chain length:n) && |
| − | && | + | && BMADBn && branched-chain a.a. derivatives(with carbon chain length:n) && |
| − | && | + | && BMADCC && cyclic and aromatic a.a. derivatives && |
| − | && | + | && BMADCCBZ && a.a. derivatives with benzene ring && |
| − | && | + | && BMADCD && a.a. derivatives with indole ring && |
| − | && | + | && BMADCZ && a.a. derivatives with imidazole ring && |
| − | && | + | && BMADCX && a.a. derivatives with other cyclic molecules && |
| − | && | + | && BMADDP && dipeptide && |
| − | && | + | && BMADTP && tripeptide && |
| − | && | + | BMFY && BMFYSn && straight-chain molecules(with carbon chain length:n) && |
| − | && | + | && BMFYBn && branched-chain molecules(with carbon chain length:n) && |
| − | && | + | BMxx && other metabolite related molecules && |
| − | && | + | && BMxxSx && CO2, CH4 and so on && |
| − | && | + | && BMxxBx && Trimethyl-amine, Isobutyro-nitrile and so on && |
| − | && | + | BMMC && mono-cyclic or cyclic assembled molecules && |
| − | + | && BMMCBZ && with benzene ring && | |
| − | && BMMCBZ && with benzene ring && | + | && BMMCBZ && with benzene ring (Substituent = 0-1,2o,2m,2p,3,4-6) && |
| − | && BMMCBZ && with benzene ring ( | + | && BMMCPD && with pyridine ring (nicotinate, pyridoxal, ...) && |
| − | && BMMCPD && with pyridine ring (nicotinate, pyridoxal, ...) && | + | && BMMCPY && with pyrimidine ring (CXP, TXP, orotate ...) && |
| − | && BMMCPY && with pyrimidine ring (CXP, TXP, orotate ...) && | + | && BMMCPYCT && with Cytosine && |
| − | && BMMCPYCT && with Cytosine && | + | && BMMCPYTY && with Thymine && |
| − | && BMMCPYTY && with Thymine && | + | && BMMCPYUR && with Uracil && |
| − | && BMMCPYUR && with Uracil && | + | && BMMCPYXX && Others && |
| − | && BMMCPYXX && Others && | + | && BMMCIZ && with imidazole ring && |
| − | && BMMCIZ && with imidazole ring && | + | && BMMCTZ && with thiazole ring (thiamine) && |
| − | && BMMCTZ && with thiazole ring (thiamine) && | + | && BMMCVA && with retinol ring (vitamin A) && |
| − | && BMMCVA && with retinol ring (vitamin A) && | + | && BMMCQN && with Quinone && |
| − | && BMMCQN && with Quinone && | + | && BMMCPL && with Pyrrolidine && |
| − | && | + | && BMMCLA && with lacton && |
| − | && BMMCAC && alicyclic molecules && | + | && BMMCAC && alicyclic molecules && |
| − | && | + | && BMMCACCH && cyclohexan && |
| − | && | + | && BMMCACEN && cyclohexen && |
| − | && | + | && BMMCACDE && cyclohexadien && |
| − | && BMCCPU && with purine ring (AXP, GXP, IXP, XXP, ...) && | + | && BMMCACxx && others && |
| − | && BMCCPUCA && with CoA && | + | && BMMCHE && hetero aromatic molecules && |
| − | && BMCCPUAD && with Adenine && | + | && BMMCAS && assembled && |
| − | && BMCCPUGU && with Guanine && | + | BMCC && conjugated cyclic molecules && |
| − | && BMCCPUIN && with Inosine && | + | && BMCCPU && with purine ring (AXP, GXP, IXP, XXP, ...) && |
| − | + | && BMCCPUCA && with CoA && | |
| − | && BMCCPUXX && others && | + | && BMCCPUAD && with Adenine && |
| − | && BMCCPT && with pteridine ring (pterin, flavine ...) && | + | && BMCCPUGU && with Guanine && |
| − | && BMCCPTFL && with Flavin && | + | && BMCCPUIN && with Inosine && |
| − | && BMCCPTFO && with Folic acid && | + | && BMCCPUXX && others(Xanthine) && |
| − | && BMCCPTPD && with Pteridine && | + | && BMCCPT && with pteridine ring (pterin, flavine ...) && |
| − | && BMCCPTPT && with Pterine && | + | && BMCCPTFL && with Flavin && |
| − | && BMCCPP && with porphyrin ring (V12, cobalamine, heme) && | + | && BMCCPTFO && with Folic acid && |
| − | && BMCCVE && with tocopherol ring (vitamin E) && | + | && BMCCPTPD && with Pteridine && |
| − | && BMCCID && with indole ring && | + | && BMCCPTPT && with Pterine && |
| − | && BMCCQL && with quinoline && | + | && BMCCPP && with porphyrin ring (V12, cobalamine, heme) && |
| − | && BMCCNP && with Naphthalen && | + | && BMCCVE && with tocopherol ring (vitamin E) && |
| − | && BMCCCR && with condensed ring && | + | && BMCCID && with indole ring && |
| − | && BMCCBR && with bridged structure && | + | && BMCCQL && with quinoline && |
| + | && BMCCNP && with Naphthalen && | ||
| + | && BMCCCR && with condensed ring && | ||
| + | && BMCCBR && with bridged structure && | ||
}} | }} | ||
| − | + | functional group list | |
| − | * | + | *CA carboxylic acid |
| − | * | + | *DA dicarboxylic acid |
| − | * | + | *SA semialdehyde |
| − | * | + | *AL aldehyde |
| − | * | + | *HO hydroxy |
| − | * | + | *OX oxo |
| − | * | + | *AM amide |
| − | * | + | *AN amine |
| − | * | + | *CN cyano, nitrile, nitro |
| − | * | + | *PH phosphate |
| + | *SF sulfur | ||
| + | *KT ketone | ||
| + | *CE CoA | ||
| + | *UM unmodified | ||
| + | *HL halogens | ||
| + | *MT metals | ||
| + | *ME methyl | ||
| + | *AK alkyl (-CH2-X) | ||
| + | *ES ester | ||
| + | *AM amide | ||
| + | *AN amine | ||
| + | *PH phosphate | ||
| + | *SF sulfur | ||
| + | *CP complexed | ||
| + | *CO carbonyl | ||
Latest revision as of 18:24, 30 April 2008
[edit] Category description
This page introduces a hierarchical classification of basic metabolites.
Class Description
| ID | Description | Note |
|---|
Basic metabolites ID list
functional group list
- CA carboxylic acid
- DA dicarboxylic acid
- SA semialdehyde
- AL aldehyde
- HO hydroxy
- OX oxo
- AM amide
- AN amine
- CN cyano, nitrile, nitro
- PH phosphate
- SF sulfur
- KT ketone
- CE CoA
- UM unmodified
- HL halogens
- MT metals
- ME methyl
- AK alkyl (-CH2-X)
- ES ester
- AM amide
- AN amine
- PH phosphate
- SF sulfur
- CP complexed
- CO carbonyl
