Template:Metabolite
From Metabolomics.JP
(Difference between revisions)
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{{{Chromatograms}}} | {{{Chromatograms}}} | ||
| + | <!-- Special:CreateNewMetabolite用 | ||
| + | 名前&&必須(blank or other)&&デフォルト値&&タイプ(line, file, text)&&説明 | ||
| + | |||
| + | {{{LipidBank&&&&&&line&&LipidBank ID}}} | ||
| + | {{{CAS&&&&&&line&&CAS ID}}} | ||
| + | {{{KEGG&&&&&&line&&KEGG ID}}} | ||
| + | {{{KNApSAcK&&&&&&line&&KNApSAcK ID}}} | ||
| + | {{{Common Name&&&&&&text&&Concatenate name by ’&&’}}} | ||
| + | {{{SysName&&&&&&line&&Systematic name}}} | ||
| + | {{{Symbol&&&&&&line&&}}} | ||
| + | {{{Melting Point&&&&&&line&&}}} | ||
| + | {{{Boiling Point&&&&&&line&&}}} | ||
| + | {{{Density&&&&&&line&&}}} | ||
| + | {{{Optical&&&&&&line&&}}} | ||
| + | {{{Reflactive&&&&&&line&&}}} | ||
| + | {{{Solubility&&&&&&line&&}}} | ||
| + | {{{Mass Spectra&&&&&&line&&}}} | ||
| + | {{{UV Spectra&&&&&&line&&}}} | ||
| + | {{{IR Spectra&&&&&&line&&}}} | ||
| + | {{{NMR Spectra&&&&&&line&&}}} | ||
| + | {{{Chromatograms&&&&&&line&&}}} | ||
| + | {{{IUPAC Name&&&&&&line&&}}} | ||
| + | --> | ||
</noinclude><includeonly> | </noinclude><includeonly> | ||
| − | + | {{#if:{{{IUPAC Name|}}}|= {{{IUPAC Name|}}} =}} | |
| − | {{ | + | |
<div> | <div> | ||
{| class="wikitable nowraplinks" border="1" cellpadding="2" cellspacing="1" style="background-color: #f8f8e0; float: right; clear: none; margin: 1em 1em 1em 1em" | {| class="wikitable nowraplinks" border="1" cellpadding="2" cellspacing="1" style="background-color: #f8f8e0; float: right; clear: none; margin: 1em 1em 1em 1em" | ||
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! colspan="2" style="background-color: #eeee99" | IDs and Links | ! colspan="2" style="background-color: #eeee99" | IDs and Links | ||
|- class{{{LipidBank|}}}="hiddenStructure" | |- class{{{LipidBank|}}}="hiddenStructure" | ||
| − | | style="width: 35%;" | [[LipidBank|LipidBank]] | + | | style="width: 35%;" | [http://lipidbank.jp/ LipidBank] |
| − | | style="width: 65%;" | {{{ | + | | style="width: 65%;" | [http://lipidbank.jp/cgi-bin/detail.cgi?id={{{LipidBank|}}} {{{LipidBank|}}}] |
| + | |- class{{{LipidMaps|}}}="hiddenStructure" | ||
| + | | style="width: 35%;" | [http://lipidmaps.org/ LipidMaps] | ||
| + | | style="width: 65%;" | [http://lipidmaps.org/data/get_lm_lipids_dbgif.php?LM_ID={{{LipidMaps|}}} {{{LipidMaps|}}}] | ||
|- class{{{CAS|}}}="hiddenStructure" | |- class{{{CAS|}}}="hiddenStructure" | ||
| − | | style="width: 35%;" | [ | + | | style="width: 35%;" | [https://scifinder.cas.org/ CAS] |
| style="width: 65%;" | {{{CAS|}}} | | style="width: 65%;" | {{{CAS|}}} | ||
|- class{{{KEGG|}}}="hiddenStructure" | |- class{{{KEGG|}}}="hiddenStructure" | ||
| − | | style="width: 35%;" | [ | + | | style="width: 35%;" | [http://www.genome.ad.jp/kegg/ KEGG] |
| − | | style="width: 65%;" | {{{KEGG | + | | style="width: 65%;" | [http://www.genome.jp/dbget-bin/www_bget?compound+{{{KEGG}}} {{{KEGG}}}] |
|- class{{{KNApSAcK|}}}="hiddenStructure" | |- class{{{KNApSAcK|}}}="hiddenStructure" | ||
| − | | style="width: 35%;" | [ | + | | style="width: 35%;" | [http://kanaya.naist.jp/KNApSAcK/ KNApSAcK] |
| style="width: 65%;" | | | style="width: 65%;" | | ||
[http://kanaya.naist.jp/knapsack_jsp/information.jsp?sname=C_ID&word={{{KNApSAcK|}}} {{{KNApSAcK}}}] | [http://kanaya.naist.jp/knapsack_jsp/information.jsp?sname=C_ID&word={{{KNApSAcK|}}} {{{KNApSAcK}}}] | ||
| Line 48: | Line 73: | ||
| style="width: 35%;" | [[cdx|CDX file]] | | style="width: 35%;" | [[cdx|CDX file]] | ||
| style="width: 65%;" | {{#ifexistfile:/data/cdx/{{#substring:{{PAGENAME}}|0|4}}/{{PAGENAME}}.cdx}} | | style="width: 65%;" | {{#ifexistfile:/data/cdx/{{#substring:{{PAGENAME}}|0|4}}/{{PAGENAME}}.cdx}} | ||
| − | |- class{{# | + | |- class{{#ifexists:Mol:{{PAGENAME}}|true|}}="hiddenStructure" |
| style="width: 35%;" | [[mol|MOL file]] | | style="width: 35%;" | [[mol|MOL file]] | ||
| − | | style="width: 65%;" | {{#ifexistfile:/data/mol/{{#substring:{{PAGENAME}}|0|4}}/{{PAGENAME}}.mol}} | + | | style="width: 65%;" | [[Mol:{{PAGENAME}}|{{PAGENAME}}.mol]]<!-- {{#ifexistfile:/data/mol/{{#substring:{{PAGENAME}}|0|4}}/{{PAGENAME}}.mol}} --> |
|} | |} | ||
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! colspan="2" style="background-color: #eeee99" | {{#cadr:{{{Common Name|}}}|&&}} | ! colspan="2" style="background-color: #eeee99" | {{#cadr:{{{Common Name|}}}|&&}} | ||
|- | |- | ||
| − | | colspan="2" align="center" | [[Image:{{PAGENAME}}.png | + | | colspan="2" align="center" | [[Image:{{PAGENAME}}.png]] |
|- | |- | ||
! colspan="2" style="background-color: #eeee99" | Structural Information | ! colspan="2" style="background-color: #eeee99" | Structural Information | ||
|- | |- | ||
| − | | style="width: 20%;" | [[SysName|Systematic Name]] | + | | style="width: 20%;" | [[Doc:SysName|Systematic Name]] |
| style="width: 80%;" | {{{SysName|}}} | | style="width: 80%;" | {{{SysName|}}} | ||
|- style="li: margin-bottom: 2px" | |- style="li: margin-bottom: 2px" | ||
| − | | style="width: 20%;" | [[ | + | | style="width: 20%;" | [[Doc:CommonName|Common Name]] |
| style="width: 80%;" |<noinclude>ここを改行しておかないと<p>タグで区切られてしまう</noinclude> | | style="width: 80%;" |<noinclude>ここを改行しておかないと<p>タグで区切られてしまう</noinclude> | ||
{{Metabolite/NameList|{{{Common Name|}}}}} | {{Metabolite/NameList|{{{Common Name|}}}}} | ||
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|- | |- | ||
| style="width: 20%;" | [[Formula|Formula]] | | style="width: 20%;" | [[Formula|Formula]] | ||
| − | | style="width: 80%;" | {{# | + | | style="width: 80%;" | {{#replace:{{#SearchLine:FORMULA|Mol|{{PAGENAME}}}}|.*FORMULA||}} |
|- | |- | ||
| style="width: 20%;" | [[Exact|Exact Mass]] | | style="width: 20%;" | [[Exact|Exact Mass]] | ||
| − | | style="width: 80%;" | {{# | + | | style="width: 80%;" | {{#replace:{{#SearchLine:EXACTMASS|Mol|{{PAGENAME}}}}|.*EXACTMASS||}} |
|- | |- | ||
| style="width: 20%;" | [[Average|Average Mass]] | | style="width: 20%;" | [[Average|Average Mass]] | ||
| − | | style="width: 80%;" | {{# | + | | style="width: 80%;" | {{#replace:{{#SearchLine:AVERAGEMASS|Mol|{{PAGENAME}}}}|.*AVERAGEMASS||}} |
|- | |- | ||
| style="width: 20%;" | [[SMILES|SMILES]] | | style="width: 20%;" | [[SMILES|SMILES]] | ||
| − | | style="width: 80%;" | <tt>{{# | + | | style="width: 80%;" | <tt>{{#forcedBR:{{#replace:{{#SearchLine:SMILES|Mol|{{PAGENAME}}}}|.*SMILES||}}|50}}</tt> |
|- | |- | ||
! colspan="2" {{#if:{{{Melting Point|}}}{{{Boiling Point|}}}{{{Density|}}}{{{Optical|}}}{{{Reflactive|}}}{{{Solubility|}}}||class="hiddenStructure"}} style="background-color: #eeee99" | Physicochemical Information | ! colspan="2" {{#if:{{{Melting Point|}}}{{{Boiling Point|}}}{{{Density|}}}{{{Optical|}}}{{{Reflactive|}}}{{{Solubility|}}}||class="hiddenStructure"}} style="background-color: #eeee99" | Physicochemical Information | ||
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|} | |} | ||
</div> | </div> | ||
| + | |||
| + | {{Metabolite/RelatedMapping|{{PAGENAME}}}} | ||
| + | |||
{{#ifeq: {{#substring:{{PAGENAME}}|0|2}}|FL| | {{#ifeq: {{#substring:{{PAGENAME}}|0|2}}|FL| | ||
| − | {{ | + | {{#def:species| {{#SearchLine:&&{{PAGENAME}}|Reference}} }} |
| − | |{{#SearchLine:&&{{PAGENAME}}|Reference}}}} | + | {{#if:{{#var:species}}| |
| + | ==Species Information== | ||
| + | {{RelationTable| {{#var:species}} }} }} | ||
}} | }} | ||
</includeonly> | </includeonly> | ||
Latest revision as of 11:04, 8 January 2010
[edit] 代謝物のテンプレート
- 引数リスト
- リンクテーブル用
{{{LipidBank}}} {{{CAS}}} {{{KEGG}}} {{{KNApSAcK}}}
- 構造テーブル用
{{{Common Name}}} {{{SysName}}} {{{Symbol}}} {{{Melting Point}}} {{{Boiling Point}}} {{{Density}}} {{{Optical}}} {{{Reflactive}}} {{{Solubility}}} {{{Mass Spectra}}} {{{UV Spectra}}} {{{IR Spectra}}} {{{NMR Spectra}}} {{{Chromatograms}}}
