Template:FL digit56

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
m (→‎Glycosylation Patterns 糖修飾パターン)
 
(18 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
{{#lua: print("[[Image:"..string.upper(string.sub(stdin,1,1))..string.lower(string.sub(stdin,2))..".png|right|100px]]")| {{{1}}} }}
 
{{#lua: print("[[Image:"..string.upper(string.sub(stdin,1,1))..string.lower(string.sub(stdin,2))..".png|right|100px]]")| {{{1}}} }}
  
−
==Hydroxylation Patterns (水酸基パターン)==
+
{{FL_pie_chart|{{{1}}}}}
−
{| class="collapsible collapsed" style="border-width:0px 0px 0px 0px;"
+
 
 +
=={{Bilingual|水酸基のパターン|Patterns of Hydroxylation}}==
 +
{| class="collapsible collapsed" style="border-width:0px 0px 0px 0px;" width="60%"
 
|- style="background:#ccf"
 
|- style="background:#ccf"
 
! Category Names in the 3rd Class
 
! Category Names in the 3rd Class
Line 27: Line 29:
  
  
−
{| class="wikitable" border="1" cellpadding="1" cellspacing="1" margin: 1em 1em 1em 1em"
+
{| class="wikitable" cellpadding="1" cellspacing="1" style="margin: 1em 1em 1em 1em"
 
|+ Details of the 3rd Class: Hydroxylation pattern of A and B rings (5th and 6th digits)
 
|+ Details of the 3rd Class: Hydroxylation pattern of A and B rings (5th and 6th digits)
 
|-
 
|-
−
|rowspan=2 colspan=2|Position of -OH (-OCH<sub>3</sub>) groups
+
|rowspan="2" colspan="2" align="center"|
 +
'''Position of -OH (-OCH<sub>3</sub>) groups'''<br/>
 +
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 6th digit &rarr;<br/>
 +
5th digit &darr;
 
|style="width:6%"| [[Image:FL___A.png|45px]]
 
|style="width:6%"| [[Image:FL___A.png|45px]]
 
|style="width:6%"| [[Image:FL___B.png|45px]]
 
|style="width:6%"| [[Image:FL___B.png|45px]]
Line 46: Line 51:
 
|style="width:6%"| [[Image:FL___9.png|45px]]
 
|style="width:6%"| [[Image:FL___9.png|45px]]
 
|-
 
|-
−
|| '''A''' || '''B''' || '''C''' || '''D''' || '''E'''
+
! {{MapLink|ListMol|{{{1}}}.A|A|}}
−
|| '''F''' || '''G''' || '''H''' || '''I''' || '''J'''
+
! {{MapLink|ListMol|{{{1}}}.B|B|}}
−
|| '''K''' || '''L''' || '''8''' || '''9'''
+
! {{MapLink|ListMol|{{{1}}}.C|C|}}
 +
! {{MapLink|ListMol|{{{1}}}.D|D|}}
 +
! {{MapLink|ListMol|{{{1}}}.E|E|}}
 +
! {{MapLink|ListMol|{{{1}}}.F|F|}}
 +
! {{MapLink|ListMol|{{{1}}}.G|G|}}
 +
! {{MapLink|ListMol|{{{1}}}.H|H|}}
 +
! {{MapLink|ListMol|{{{1}}}.I|I|}}
 +
! {{MapLink|ListMol|{{{1}}}.J|J|}}
 +
! {{MapLink|ListMol|{{{1}}}.K|K|}}
 +
! {{MapLink|ListMol|{{{1}}}.L|L|}}
 +
! {{MapLink|ListMol|{{{1}}}.8|8|}}
 +
! {{MapLink|ListMol|{{{1}}}.9|9|}}
 
|-
 
|-
−
|[[Image:FL__A_.png|60px]] || '''A'''
+
|[[Image:FL__A_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}A|A|}}
 
| {{FL_digit78|{{{1}}}AA}}
 
| {{FL_digit78|{{{1}}}AA}}
 
| {{FL_digit78|{{{1}}}AB}}
 
| {{FL_digit78|{{{1}}}AB}}
Line 66: Line 83:
 
|rowspan="4"| {{FL_digit78|{{{1}}}A9}}
 
|rowspan="4"| {{FL_digit78|{{{1}}}A9}}
 
|-
 
|-
−
|[[Image:FL__B_.png|60px]] || '''B'''
+
|[[Image:FL__B_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}B|B|}}
 
| {{FL_digit78|{{{1}}}BA}}
 
| {{FL_digit78|{{{1}}}BA}}
 
| {{FL_digit78|{{{1}}}BB}}
 
| {{FL_digit78|{{{1}}}BB}}
Line 79: Line 97:
 
| {{FL_digit78|{{{1}}}BK}}
 
| {{FL_digit78|{{{1}}}BK}}
 
|-
 
|-
−
|[[Image:FL__C_.png|60px]] || '''C'''
+
|[[Image:FL__C_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}C|C|}}
 
| {{FL_digit78|{{{1}}}CA}}
 
| {{FL_digit78|{{{1}}}CA}}
 
| {{FL_digit78|{{{1}}}CB}}
 
| {{FL_digit78|{{{1}}}CB}}
Line 92: Line 111:
 
| {{FL_digit78|{{{1}}}CK}}
 
| {{FL_digit78|{{{1}}}CK}}
 
|-
 
|-
−
|[[Image:FL__D_.png|60px]] || '''D'''
+
|[[Image:FL__D_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}D|D|}}
 
| {{FL_digit78|{{{1}}}DA}}
 
| {{FL_digit78|{{{1}}}DA}}
 
| {{FL_digit78|{{{1}}}DB}}
 
| {{FL_digit78|{{{1}}}DB}}
Line 105: Line 125:
 
| {{FL_digit78|{{{1}}}DK}}
 
| {{FL_digit78|{{{1}}}DK}}
 
|-
 
|-
−
|[[Image:FL__E_.png|60px]] || '''E'''
+
|[[Image:FL__E_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}E|E|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}EA}}
 
|colspan="2"| {{FL_digit78|{{{1}}}EA}}
 
|colspan="4"| {{FL_digit78|{{{1}}}EC}}
 
|colspan="4"| {{FL_digit78|{{{1}}}EC}}
Line 113: Line 134:
 
| {{FL_digit78|{{{1}}}E9}}
 
| {{FL_digit78|{{{1}}}E9}}
 
|-
 
|-
−
|[[Image:FL__F_.png|60px]] || '''F'''
+
|[[Image:FL__F_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}F|F|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}FA}}
 
|colspan="2"| {{FL_digit78|{{{1}}}FA}}
 
|colspan="4"| {{FL_digit78|{{{1}}}FC}}
 
|colspan="4"| {{FL_digit78|{{{1}}}FC}}
Line 121: Line 143:
 
| {{FL_digit78|{{{1}}}F9}}
 
| {{FL_digit78|{{{1}}}F9}}
 
|-
 
|-
−
|[[Image:FL__G_.png|60px]] || '''G'''
+
|[[Image:FL__G_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}G|G|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}GA}}  
 
|colspan="2"| {{FL_digit78|{{{1}}}GA}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}GC}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}GC}}  
Line 129: Line 152:
 
| {{FL_digit78|{{{1}}}G9}}
 
| {{FL_digit78|{{{1}}}G9}}
 
|-
 
|-
−
|[[Image:FL__1_.png|60px]] || '''1'''
+
|[[Image:FL__1_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}1|1|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}1A}}  
 
|colspan="2"| {{FL_digit78|{{{1}}}1A}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}1C}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}1C}}  
Line 137: Line 161:
 
| {{FL_digit78|{{{1}}}19}}
 
| {{FL_digit78|{{{1}}}19}}
 
|-
 
|-
−
|[[Image:FL__2_.png|60px]] || '''2'''
+
|[[Image:FL__2_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}2|2|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}2A}}  
 
|colspan="2"| {{FL_digit78|{{{1}}}2A}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}2C}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}2C}}  
Line 145: Line 170:
 
| {{FL_digit78|{{{1}}}29}}
 
| {{FL_digit78|{{{1}}}29}}
 
|-
 
|-
−
|[[Image:FL__3_.png|60px]] || '''3'''
+
|[[Image:FL__3_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}3|3|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}3A}}  
 
|colspan="2"| {{FL_digit78|{{{1}}}3A}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}3C}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}3C}}  
Line 153: Line 179:
 
| {{FL_digit78|{{{1}}}39}}
 
| {{FL_digit78|{{{1}}}39}}
 
|-
 
|-
−
|[[Image:FL__4_.png|60px]] || '''4'''
+
|[[Image:FL__4_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}4|4|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}4A}}  
 
|colspan="2"| {{FL_digit78|{{{1}}}4A}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}4C}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}4C}}  
Line 161: Line 188:
 
| {{FL_digit78|{{{1}}}49}}
 
| {{FL_digit78|{{{1}}}49}}
 
|-
 
|-
−
|[[Image:FL__9_.png|60px]] || '''9'''
+
|[[Image:FL__9_.png|60px]]
 +
! {{MapLink|ListMol|{{{1}}}9|9|}}
 
|colspan="2"| {{FL_digit78|{{{1}}}9A}}  
 
|colspan="2"| {{FL_digit78|{{{1}}}9A}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}9C}}  
 
|colspan="4"| {{FL_digit78|{{{1}}}9C}}  
Line 193: Line 221:
 
''O'' <small>modified with other sugars</small>;
 
''O'' <small>modified with other sugars</small>;
  
−
 
+
=={{Bilingual|その他特殊な構造|Other Unusual Patterns}}==
−
==Other Unusual Patterns (特殊な構造)==
+
 
{{Twocolumn|
 
{{Twocolumn|
 
These types are not classified in the above chart.
 
These types are not classified in the above chart.
Line 216: Line 243:
 
|}
 
|}
  
−
==Glycosylation Patterns (糖修飾パターン)==
+
=={{Bilingual|糖修飾のパターン|Patterns of Glycosylation}}==
  
 
{{Twocolumn|
 
{{Twocolumn|
Line 230: Line 257:
 
|+ Details of the 4th Class: Glycosylation patterns (7th and 8th digits)
 
|+ Details of the 4th Class: Glycosylation patterns (7th and 8th digits)
 
|-
 
|-
−
|colspan=2|
+
|colspan="2" align="center"| &nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 7th digit &rarr;<br/>8th digit &darr;
−
| '''N:''' no glycosylation
+
! No glycosylation {{MapLink|ListMol|{{{1}}}..N|N|}}
−
| '''G:''' O-glycoside
+
! O-glycoside {{MapLink|ListMol|{{{1}}}..G|G|}}
−
| '''C:''' C-glycoside
+
! C-glycoside {{MapLink|ListMol|{{{1}}}..C|C|}}
−
| '''D:''' O- & C-glycoside
+
! O- & C-glycoside {{MapLink|ListMol|{{{1}}}..D|D|}}
 
|-  
 
|-  
 
| no modification
 
| no modification
−
|align=center| '''S'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...S|S|}}
 
| {{FL_digit56with78|{{{1}}}..NS}}
 
| {{FL_digit56with78|{{{1}}}..NS}}
 
| {{FL_digit56with78|{{{1}}}..GS}}
 
| {{FL_digit56with78|{{{1}}}..GS}}
Line 244: Line 271:
 
|-  
 
|-  
 
| alkylated
 
| alkylated
−
|align=center| '''M'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...M|M|}}
 
| {{FL_digit56with78|{{{1}}}..NM}}
 
| {{FL_digit56with78|{{{1}}}..NM}}
 
| {{FL_digit56with78|{{{1}}}..GM}}
 
| {{FL_digit56with78|{{{1}}}..GM}}
Line 251: Line 278:
 
|-  
 
|-  
 
| prenylated
 
| prenylated
−
|align=center| '''I'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}..I|I|}}
 
| {{FL_digit56with78|{{{1}}}..NI}}
 
| {{FL_digit56with78|{{{1}}}..NI}}
 
| {{FL_digit56with78|{{{1}}}..GI}}
 
| {{FL_digit56with78|{{{1}}}..GI}}
Line 258: Line 285:
 
|-  
 
|-  
 
| cyclic prenylated
 
| cyclic prenylated
−
|align=center| '''R'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}..R|R|}}
 
| {{FL_digit56with78|{{{1}}}..NR}}
 
| {{FL_digit56with78|{{{1}}}..NR}}
 
| {{FL_digit56with78|{{{1}}}..GR}}
 
| {{FL_digit56with78|{{{1}}}..GR}}
Line 265: Line 292:
 
|-  
 
|-  
 
| furano FL
 
| furano FL
−
|align=center| '''F'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...F|F|}}
 
| {{FL_digit56with78|{{{1}}}..NF}}
 
| {{FL_digit56with78|{{{1}}}..NF}}
 
| {{FL_digit56with78|{{{1}}}..GF}}
 
| {{FL_digit56with78|{{{1}}}..GF}}
Line 272: Line 299:
 
|-  
 
|-  
 
| pyrano FL
 
| pyrano FL
−
|align=center| '''P'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...P|P|}}
 
| {{FL_digit56with78|{{{1}}}..NP}}
 
| {{FL_digit56with78|{{{1}}}..NP}}
 
| {{FL_digit56with78|{{{1}}}..GP}}
 
| {{FL_digit56with78|{{{1}}}..GP}}
Line 279: Line 306:
 
|-  
 
|-  
 
| furano & pyrano FL
 
| furano & pyrano FL
−
|align=center| '''D'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...D|D|}}
 
| {{FL_digit56with78|{{{1}}}..ND}}
 
| {{FL_digit56with78|{{{1}}}..ND}}
 
| {{FL_digit56with78|{{{1}}}..GD}}
 
| {{FL_digit56with78|{{{1}}}..GD}}
Line 286: Line 313:
 
|-  
 
|-  
 
| prenylpropanoid
 
| prenylpropanoid
−
|align=center| '''N'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...N|N|}}
 
| {{FL_digit56with78|{{{1}}}..NN}}
 
| {{FL_digit56with78|{{{1}}}..NN}}
 
| {{FL_digit56with78|{{{1}}}..GN}}
 
| {{FL_digit56with78|{{{1}}}..GN}}
Line 293: Line 320:
 
|-  
 
|-  
 
| others
 
| others
−
|align=center| '''C'''
+
!style="text-align:center"| {{MapLink|ListMol|{{{1}}}...C|C|}}
 
| {{FL_digit56with78|{{{1}}}..NC}}
 
| {{FL_digit56with78|{{{1}}}..NC}}
 
| {{FL_digit56with78|{{{1}}}..GC}}
 
| {{FL_digit56with78|{{{1}}}..GC}}
Line 300: Line 327:
 
|- class{{#ifeq:{{#substring:{{{1}}}|0|3}}|FL7|show|}}="hiddenStructure"
 
|- class{{#ifeq:{{#substring:{{{1}}}|0|3}}|FL7|show|}}="hiddenStructure"
 
| 3-Gal related
 
| 3-Gal related
−
|align=center| '''A'''
+
!style="text-align:center"| A
 
| N.A.
 
| N.A.
 
| {{FL_digit56with78|{{{1}}}..GA}}
 
| {{FL_digit56with78|{{{1}}}..GA}}
Line 307: Line 334:
 
|- class{{#ifeq:{{#substring:{{{1}}}|0|3}}|FL7|show|}}="hiddenStructure"
 
|- class{{#ifeq:{{#substring:{{{1}}}|0|3}}|FL7|show|}}="hiddenStructure"
 
| 3-Glc related
 
| 3-Glc related
−
|align=center| '''L'''
+
!style="text-align:center"| L
 
| N.A.
 
| N.A.
 
| {{FL_digit56with78|{{{1}}}..GL}}
 
| {{FL_digit56with78|{{{1}}}..GL}}
Line 314: Line 341:
 
|- class{{#ifeq:{{#substring:{{{1}}}|0|3}}|FL7|show|}}="hiddenStructure"
 
|- class{{#ifeq:{{#substring:{{{1}}}|0|3}}|FL7|show|}}="hiddenStructure"
 
| other sugar at 3
 
| other sugar at 3
−
|align=center| '''O'''
+
!style="text-align:center"| O
 
| N.A.
 
| N.A.
 
| {{FL_digit56with78|{{{1}}}..GO}}
 
| {{FL_digit56with78|{{{1}}}..GO}}

Latest revision as of 17:16, 18 August 2010

[[Image: {{{1}}} .png|right|100px]]


Contents

 [hide] 

[edit] Major Plant Families

 The number in each family is counted as the number of genera (not species) listed in our registered references. Each reference record is accessible by clicking the link in compound pages. The taxonomy follows the APG-II classification. For details (or if the figure is broken), visit this page.

各科のカウントは種名でなく文献に記載された属名の数です。文献は代謝物ページのリンクからたどれ、分類はAPG-IIです。左の図が表示されない場合はここをクリックしてください。

[edit] Patterns of Hydroxylation

The 5th and 6th digits of our flavonoid ID indicates the hydroxylation patterns of A-ring and B-ring (See the upper-right figure. The leftmost ring is A, rightmost is B), respectively. The following chart is spanned by these 2 digits. R indicates H or CH3, and R' indicates H or R. Numbers are IUPAC positions. The value in each cell (such as GS: glycosilation only) corresponds to the 7th and 8th digits, which is explained at the bottom of this page.


Details of the 3rd Class: Hydroxylation pattern of A and B rings (5th and 6th digits)

Position of -OH (-OCH3) groups
      6th digit →
5th digit ↓

FL A.png FL B.png FL C.png FL D.png FL E.png FL F.png FL G.png FL H.png FL I.png FL J.png FL K.png FL L.png FL 8.png FL 9.png
 A (0 pages)  B (0 pages)  C (0 pages)  D (0 pages)  E (0 pages)  F (0 pages)  G (0 pages)  H (0 pages)  I (0 pages)  J (0 pages)  K (0 pages)  L (0 pages)  8 (0 pages)  9 (0 pages)
FL A .png  A (0 pages)
FL B .png  B (0 pages)
FL C .png  C (0 pages)
FL D .png  D (0 pages)
FL E .png  E (0 pages)
FL F .png  F (0 pages)
FL G .png  G (0 pages)
FL 1 .png  1 (0 pages)
FL 2 .png  2 (0 pages)
FL 3 .png  3 (0 pages)
FL 4 .png  4 (0 pages)
FL 9 .png  9 (0 pages)

Abbreviations used in the above chart

First Characters 

N not glycosylated; G O-glycoside; C C-glycoside; D both glycosides;

Second Characters 

S not modified; M alkylated; I prenylated; R cyclic-prenylated; F furanoFL; P pyranoFL; D furano and pyranoFL; N phenylpropanoid; C others;

Special Second Character only for Anthycyanin (FL7) 

A Galactosylated; L Glucosylated; O modified with other sugars;

[edit] Other Unusual Patterns

These types are not classified in the above chart.

Quinone  QU (0 pages) alpha-Hydroxy  HX (0 pages) beta-Hydroxy  HY (0 pages) Peltogynoid  PT (0 pages)
Retrocalchone  RT (0 pages) Dehydro-backbone  WX (0 pages) Additional rings  RN (0 pages) Others  UN (0 pages)
Pyranoanthocyanin (FL7 only)  RX (0 pages)

[edit] Patterns of Glycosylation

The 7th and 8th digits of the flavonoid ID indicates the glycosylation, and other modification patterns, respectively. The following chart is spanned by these 2 digits. The value in each cell (such as AA for the standard form) corresponds to the 5th and 6th digits.


Details of the 4th Class: Glycosylation patterns (7th and 8th digits)
      7th digit →
8th digit ↓ 		No glycosylation  N (0 pages) O-glycoside  G (0 pages) C-glycoside  C (0 pages) O- & C-glycoside  D (0 pages)
no modification  S (0 pages)
alkylated  M (0 pages)
prenylated  I (0 pages)
cyclic prenylated  R (0 pages)
furano FL  F (0 pages)
pyrano FL  P (0 pages)
furano & pyrano FL  D (0 pages)
prenylpropanoid  N (0 pages)
others  C (0 pages)
3-Gal related A N.A. N.A. N.A.
3-Glc related L N.A. N.A. N.A.
other sugar at 3 O N.A. N.A. N.A.
Retrieved from "http://metabolomics.jp/mediawiki/index.php?title=Template:FL_digit56&oldid=35344"
Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox