Help:Contents

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==What is Metabolomics?==
 
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''Metabolomics'' is a research field to investigate the entire small molecules within cells.  By definition, it includes analysis of oligosaccharides, oligopeptides, lipids, and nucleic acids. The analysis target, all metabolites, is called ''metabolome''. Some say the field is the 3rd omics that follows genomics for all genes and proteomics for all proteins. However, metabolomics is a larger concept, including (small) peptides and nucleic acids. To elucidate the metabolome, we need to fully exercise various extraction- and measurement technologies.
 
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細胞内の代謝物を網羅的に解析しようとする学問分野を「メタボロミクス」と呼びます。定義上、オリゴ糖やオリゴペプチド、脂質や核酸も含みます。それらの対象（全ての代謝物）を「メタボローム」と呼びます。遺伝子の総体を研究するゲノミクス、タンパク質の総体を研究するプロテオミクスに続く、第三のオミクスとも言われますが、DNAやアミノ酸、ペプチドも代謝物であることから、メタボロミクスはより幅広い概念です。その全容を知るには様々な抽出法や計測技術を駆使しなくてはなりません。
 
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This site is created, edited, and maintained by Arita Laboratory, Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo.
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This site is created, edited, and maintained by Arita Laboratory, National Institute of Genetics.
 
Descriptions on this website are, if not otherwise specified, written by Masanori Arita.
 
Descriptions on this website are, if not otherwise specified, written by Masanori Arita.
 
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このサイトは、東京大学大学院理学系研究科生物化学専攻の有田研究室によって開設、編集、運営されています。
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このサイトは国立遺伝学研究所の有田研究室によって開設、編集、運営されています。
 
このサイト内の記述は、そうでないと明記されない限り、有田正規が執筆しています（文責）。
 
このサイト内の記述は、そうでないと明記されない限り、有田正規が執筆しています（文責）。
 
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* [[User:Aritalab|授業資料はこちらから]]
 
  
 
=={{Bilingual|引用のしかた|How to Cite Us}}==
 
=={{Bilingual|引用のしかた|How to Cite Us}}==
 
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If you are interested in our Wiki-based database (including ''persist'' and ''volatile'' functions), please read [http://www.biodatamining.org/content/1/1/7 our paper in ''BioData Mining''].  If you are interested in the classification strategy of flavonoid or other metabolites, please wait for our paper in preparation.   
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If you are interested in our Wiki-based database (including ''persist'' and ''volatile'' functions), please read [http://www.biodatamining.org/content/1/1/7 our paper in ''BioData Mining''].  You may link to our contents freely.   
 
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データ管理方法（Wikiを用いたデータベース一般）に興味のある方は、以下のBioData Mining誌をご覧ください。もしフラボノイドや他の化合物群に関する分類ストラテジーに興味がある方は、現在準備中の論文をお待ちください。
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データ管理方法（Wikiを用いたデータベース一般）に興味のある方は、以下のBioData Mining誌をご覧ください。リンクは自由におこなってください。
 
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==={{Bilingual|データベースについて|About this database}}===
 
==={{Bilingual|データベースについて|About this database}}===
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=={{Bilingual|スタッフ|Staff}}==
 
=={{Bilingual|スタッフ|Staff}}==
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We are the only people! Currently, this site is write protected.
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* Masanori Arita Ph.D (principal investigator)
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このスタッフで全てを作成しています。一般からの書き込みは現在許していません。
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==={{Bilingual|現在|Current}}===
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* [http://metabolome.jp/aboutUs/aritalab/members/arita/ Masanori Arita Ph.D (principal investigator)]
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* Kazuhiro Suwa (programmer)
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* Miwa Yoshimoto (data curator)
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==={{Bilingual|過去|Past}}===
 
==={{Bilingual|過去|Past}}===
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* Kazuhiro Suwa
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* Miwa Yoshimoto
 
* Toshiaki Tokimatsu, Ph.D
 
* Toshiaki Tokimatsu, Ph.D
 
* Yukiko Nakanishi
 
* Yukiko Nakanishi

Latest revision as of 10:22, 22 February 2017


Contents

[edit] About Us

This site is created, edited, and maintained by Arita Laboratory, National Institute of Genetics. Descriptions on this website are, if not otherwise specified, written by Masanori Arita.

[edit] How to Cite Us

If you are interested in our Wiki-based database (including persist and volatile functions), please read our paper in BioData Mining. You may link to our contents freely.

[edit] About this database

[edit] About Flavonoid classification

  • Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." Saibou Kougaku (in Japanese), 25(12):1388-1393, 2006
  • Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19), Singapore, 3-14, 2007 [PMID 18546500]


[edit] Staff

  • Masanori Arita Ph.D (principal investigator)


[edit] Past

  • Kazuhiro Suwa
  • Miwa Yoshimoto
  • Toshiaki Tokimatsu, Ph.D
  • Yukiko Nakanishi
  • Yukiko Fujiwara
  • Tadashi Gambe

[edit] Funding

  • Grant-in-Aid for Scientific Research on Priority Areas "Systems Genomics" from Ministry of Education, Culture, Sports, Science and Technology, Japan (文部科学省科研費補助金 特定領域研究ゲノム「システム生命情報」
  • Institute for Bioinformatics Research and Development, Japan Science and Technology Agency, Japan　（JST-BIRD)
  • Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Japan (JSTさきがけ シミュレーション技術の革新と実用化基盤の構築)

[edit] System Organization

This site is build on MediaWiki. Total number of data pages is 20719.

[edit] Source code of our site specific extensions


[edit] For Administrators

Retrieved from "http://metabolomics.jp/mediawiki/index.php?title=Help:Contents&oldid=315251"
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