PKS:AN7909

Latest revision as of 15:35, 26 March 2013

Aspergillus nidulans FGSC A4 (GenBank XP_681178) all species
Class	NRPKS (length: 2103) all classes Class in KS domain phylogeny	Reliability
Product	Orsellinic acid(sterigmatocystin)/F9975/violaceols	GeneName	orsA
UniProt,UniRef90	C8V4V0 , C8V4V0	UniRef50	C8V4V0
Domain by MAPSI	KS-AT-ACP-ACP-CYC (notation help / all patterns)
Domain by CDD	KS-AT-(DH)-PP-PP-(TE) (notation help / all patterns)
Domain by ITER-DB	KS-AT-ACP-ACP-CYC (notation help / all patterns)
Estimated Domain	SAT-KS-AT-PT-ACP-ACP-TE
Description	hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4]
Information	ANIA07909 is possibly classified into NRPKS.Because it's DH domain is incomplete and short( 77 aa). Although it contains DH domain, it might belong NRPKS. Predicted cluster size: 5 genes.
References	Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012 Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013 Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link	AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

@@ Line 3: / Line 3: @@
 |species=Aspergillus nidulans FGSC A4
 |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
-|product=orsellinic acid (sterigmatocystin)
+|product=Orsellinic acid(sterigmatocystin)/F9975/violaceols
 |GenBank=XP_681178
 |UniProt=C8V4V0
 |UniRef90=C8V4V0
 |UniRef50=C8V4V0
-|geneName=
+|geneName=orsA
 |MAPSI=KS-AT-ACP-ACP-CYC
-|CDD=KS-AT-DH-PP-PP-EL
+|CDD=KS-AT-(DH)-PP-PP-(TE)
-|class=PRPKS
+|ITERDB=KS-AT-ACP-ACP-CYC
+|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE
+|class=NRPKS
 |reliability=
 |description=hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4]
-|information=
+|information=ANIA07909 is possibly classified into NRPKS.Because it's DH domain is incomplete and short( 77 aa). Although it contains DH domain, it might belong NRPKS. Predicted cluster size: 5 genes.
 |length=2103
+|references=\*Li.+2010$~\*Ahuja.+2012$~\*Andersen.+2013$
 }}
 {{{{NAMESPACE}}/Footer}}