Help:PKS
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m (New page: ==Domain Abbreviations== {| |- | '''A''' || Adenylation domain |- | '''ACP''' || Acyl Carrier Protein |- | '''AT''' || Acyl Transferase |- | '''C''' || Condensation domain |- | '''CHS''' ...) |
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==Domain Abbreviations== | ==Domain Abbreviations== | ||
| − | {| | + | {| |
|- | |- | ||
| − | | '''A''' || Adenylation domain | + | | '''A''' || Adenylation domain (NRPS) |
|- | |- | ||
| − | | ''' | + | | '''Aes''' || Esterase/lipase |
|- | |- | ||
| − | | ''' | + | | '''ACP''' || Acyl Carrier Protein (= PP) |
|- | |- | ||
| − | | ''' | + | | '''Alkanal_monooxy''' || Alkanal monooxygenase, a flavin monoxygenases. |
|- | |- | ||
| − | | '''CHS''' || Chalcone synthase | + | | '''AMT''' || Aminotransferase |
| + | |- | ||
| + | | '''AT''' || Acyl-transferase | ||
| + | |- | ||
| + | | '''C''' || Condensation domain (=Con)(NRPS) | ||
| + | |- | ||
| + | | '''Carn''' || Choline/Carnitine o-acyltransferase | ||
| + | |- | ||
| + | | '''CHS''' || Chalcone-synthase | ||
| + | |- | ||
| + | | '''CLC''' || Claisen cyclase | ||
| + | |- | ||
| + | | '''CYC''' || Cyclase | ||
| + | |- | ||
| + | | '''Cyt''' || Cytochrome b5-like Heme/Steroid binding domain | ||
| + | |- | ||
| + | | '''CytR''' || Cytochrome b5 reductase | ||
| + | |- | ||
| + | | '''DAP2''' || Dipeptidyl aminopeptidases/acylaminoacyl-peptidases | ||
|- | |- | ||
| '''DH''' || Dehydratase | | '''DH''' || Dehydratase | ||
| Line 16: | Line 34: | ||
| '''EC''' || Enoyl CoA hydratase | | '''EC''' || Enoyl CoA hydratase | ||
|- | |- | ||
| − | | '''ER''' || Enoyl reductase | + | | '''EL''' || Esterase/lipase |
| + | |- | ||
| + | | '''EntF''' || Non-ribosomal peptide synthetase modules and related proteins(NRPS) | ||
| + | |- | ||
| + | | '''ER''' || Enoyl-reductase | ||
| + | |- | ||
| + | | '''FT''' || Fungal specific transcription factor domain | ||
| + | |- | ||
| + | | '''Gal4''' || GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain | ||
| + | |- | ||
| + | | '''HxxPF_rpt''' || HxxPF-repeated domain (NRPS) | ||
| + | |- | ||
| + | | '''KBL_like''' || 2-amino-3-ketobutyrate CoA ligase (KBL). This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily | ||
| + | |- | ||
| + | | '''KR''' || Keto-reductase | ||
| + | |- | ||
| + | | '''KS''' || Keto-synthase | ||
| + | |- | ||
| + | | '''MAT''' || Malonyl-CoA: acyl carrier protein transacylase | ||
| + | |- | ||
| + | | '''ME''' || Methyl-tranferase (= MT)(= CMeT)(=CM) | ||
| + | |- | ||
| + | | '''OAT_like''' || Acetyl ornithine aminotransferase | ||
| + | |- | ||
| + | | '''PhyH''' || Phytanoyl-CoA dioxygenase (PhyH) | ||
| + | |- | ||
| + | | '''PP''' || Phosphopantetheine (= ACP) | ||
| + | |- | ||
| + | | '''PRK12323''' || DNA polymerase III subunits gamma and tau | ||
|- | |- | ||
| − | | ''' | + | | '''PS''' || Pyran-synthase |
|- | |- | ||
| − | | ''' | + | | '''PT''' || Product template (NR-PKS) |
|- | |- | ||
| − | | ''' | + | | '''R ''' || terminal thiolester reductase (=TR) |
|- | |- | ||
| − | | ''' | + | | '''SAT''' || Starter unit-ACP transacylase (NR-PKS) |
|- | |- | ||
| − | | ''' | + | | '''T''' || Thiolation domain (NRPS) |
|- | |- | ||
| − | | ''' | + | | '''TE''' || Thio-esterase |
|- | |- | ||
| − | | ''' | + | | '''TH''' || Thioester hydrolase |
|} | |} | ||
Latest revision as of 03:07, 14 September 2012
[edit] Domain Abbreviations
| A | Adenylation domain (NRPS) |
| Aes | Esterase/lipase |
| ACP | Acyl Carrier Protein (= PP) |
| Alkanal_monooxy | Alkanal monooxygenase, a flavin monoxygenases. |
| AMT | Aminotransferase |
| AT | Acyl-transferase |
| C | Condensation domain (=Con)(NRPS) |
| Carn | Choline/Carnitine o-acyltransferase |
| CHS | Chalcone-synthase |
| CLC | Claisen cyclase |
| CYC | Cyclase |
| Cyt | Cytochrome b5-like Heme/Steroid binding domain |
| CytR | Cytochrome b5 reductase |
| DAP2 | Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
| DH | Dehydratase |
| EC | Enoyl CoA hydratase |
| EL | Esterase/lipase |
| EntF | Non-ribosomal peptide synthetase modules and related proteins(NRPS) |
| ER | Enoyl-reductase |
| FT | Fungal specific transcription factor domain |
| Gal4 | GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain |
| HxxPF_rpt | HxxPF-repeated domain (NRPS) |
| KBL_like | 2-amino-3-ketobutyrate CoA ligase (KBL). This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily |
| KR | Keto-reductase |
| KS | Keto-synthase |
| MAT | Malonyl-CoA: acyl carrier protein transacylase |
| ME | Methyl-tranferase (= MT)(= CMeT)(=CM) |
| OAT_like | Acetyl ornithine aminotransferase |
| PhyH | Phytanoyl-CoA dioxygenase (PhyH) |
| PP | Phosphopantetheine (= ACP) |
| PRK12323 | DNA polymerase III subunits gamma and tau |
| PS | Pyran-synthase |
| PT | Product template (NR-PKS) |
| R | terminal thiolester reductase (=TR) |
| SAT | Starter unit-ACP transacylase (NR-PKS) |
| T | Thiolation domain (NRPS) |
| TE | Thio-esterase |
| TH | Thioester hydrolase |
