PKS:Fung134

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{{{{NAMESPACE}}/Header}}
 
{{{{NAMESPACE}}/Header}}
 
{{PKSinfo
 
{{PKSinfo
|species=
+
|species=Penicillium aethiopicum
|taxonomy=
+
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
 +
            Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae;
 +
            mitosporic Trichocomaceae; Penicillium
 
|product=viridicatumtoxin
 
|product=viridicatumtoxin
 
|GenBank=ADI24926
 
|GenBank=ADI24926
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|UniRef50=
 
|UniRef50=
 
|geneName=vertA
 
|geneName=vertA
|MAPSI=
+
|MAPSI=KS-AT-ACP
|CDD=
+
|CDD=KS-AT-PP
 +
|ITERDB=KS-AT-ACP
 +
|InferredDomain=SAT-KS-AT-PT-ACP
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=
 
|reliability=
 
|description=
 
|description=
 
|information=
 
|information=
|length=
+
|length=1824
|references=\*Li.+2010$
+
|references=\*Li.+2010$~\*Chooi.+2010$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 20:52, 11 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Penicillium aethiopicum (GenBank ADI24926) all species
Class NRPKS (length: 1824) all classes   Class 10.NRPKS_I(3) in KS domain phylogeny Reliability
Product viridicatumtoxin GeneName vertA
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description
Information
References
  • Chooi YH, Cacho R, Tang Y: Identification of the viridicatumtoxin and griseofulvin gene clusters from penicillium aethiopicum. Chem Biol 17(5):483-494, 2010
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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