PKS:Fung096
From Metabolomics.JP
(Difference between revisions)
(update references and information) |
|||
| (One intermediate revision by one user not shown) | |||
| Line 4: | Line 4: | ||
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Sordariomyceta; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium | |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Sordariomyceta; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium | ||
|product= | |product= | ||
| − | |GenBank=XP_001219763 | + | |GenBank=XP_001219763 |
|geneName=pks19 | |geneName=pks19 | ||
|MAPSI=KS-AT-ACP-ACP-CYC | |MAPSI=KS-AT-ACP-ACP-CYC | ||
| Line 10: | Line 10: | ||
|InferredDomain=SAT-KS-AT-ACP-ACP-TE/CLC | |InferredDomain=SAT-KS-AT-ACP-ACP-TE/CLC | ||
|class=NRPKS | |class=NRPKS | ||
| − | |reliability= | + | |reliability=characterized |
|description=polyketide synthase [Chaetomium globosum CBS 148.51] | |description=polyketide synthase [Chaetomium globosum CBS 148.51] | ||
| − | |information= Polyketide products biosynthesized by PKS XP_001219763 (CHGG_00542, id in Chaetomium globosum CBS 148.51) in yeast have been identified. A mutation in the TE/CLC domain of XP_001219763 will cause the production of different compounds. XP_001219763 might be functionally equivalent to PKS1 of A.oryzae. | + | |information= EAQ92307.1. Polyketide products biosynthesized by PKS XP_001219763 (CHGG_00542, id in Chaetomium globosum CBS 148.51) in yeast have been identified. A mutation in the TE/CLC domain of XP_001219763 will cause the production of different compounds. XP_001219763 might be functionally equivalent to PKS1 of A.oryzae. |
|length=2181 | |length=2181 | ||
|references=\*Li.+2010$~\*Ishiuchi.+2012$ | |references=\*Li.+2010$~\*Ishiuchi.+2012$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 16:40, 18 August 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Chaetomium globosum CBS 148.51 (GenBank XP_001219763) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2181) all classes Class 11.NRPKS_I(4a)melanin in KS domain phylogeny | Reliability | characterized |
| Product | GeneName | pks19 | |
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | KS-AT-PP-PP-TE | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | SAT-KS-AT-ACP-ACP-TE/CLC | ||
| Description | polyketide synthase [Chaetomium globosum CBS 148.51] | ||
| Information | EAQ92307.1. Polyketide products biosynthesized by PKS XP_001219763 (CHGG_00542, id in Chaetomium globosum CBS 148.51) in yeast have been identified. A mutation in the TE/CLC domain of XP_001219763 will cause the production of different compounds. XP_001219763 might be functionally equivalent to PKS1 of A.oryzae. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
