PKS:FAS 03

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|reliability=
 
|reliability=
 
|description="novel protein containing a beta-ketoacyl synthase, N-terminal domain [Danio rerio]"
 
|description="novel protein containing a beta-ketoacyl synthase, N-terminal domain [Danio rerio]"
|information="Outgroup, FAS"
+
|information=Outgroup, FAS. ER domain is belong to MDR family. MDR is recognized as ER domain
 
|length=2104
 
|length=2104
 
|references=\*Schmitt.+2009$
 
|references=\*Schmitt.+2009$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 01:20, 13 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Danio rerio (GenBank CAI21194) all species
Class FAS (length: 2104) all classes   Class 01.FAS in KS domain phylogeny Reliability
Product beta-ketoacyl synthase GeneName
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-(MDR)-KR-PP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description "novel protein containing a beta-ketoacyl synthase, N-terminal domain [Danio rerio]"
Information Outgroup, FAS. ER domain is belong to MDR family. MDR is recognized as ER domain
References
  • Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi. PLoS One 4:e4437, 2009
Link 03 AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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