PKS:Bact16
From Metabolomics.JP
(Difference between revisions)
| Line 7: | Line 7: | ||
|geneName=cyrB | |geneName=cyrB | ||
|MAPSI=KS-AT-DH-KR-ACP | |MAPSI=KS-AT-DH-KR-ACP | ||
| − | |CDD= | + | |CDD=A-PP-KS-AT-DH-ME-KR-PP |
|class=NRPS-PKS | |class=NRPS-PKS | ||
|reliability=putative | |reliability=putative | ||
|description=mixed NRPS/PKS [Cylindrospermopsis raciborskii AWT205] | |description=mixed NRPS/PKS [Cylindrospermopsis raciborskii AWT205] | ||
| − | |information=AA-adenyl-domain and PP | + | |information=AA-adenyl-domain and PP domain are in front of KS. |
|length=2917 | |length=2917 | ||
|references=\*Fisch.+2009$ | |references=\*Fisch.+2009$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 02:28, 26 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Cylindrospermopsis raciborskii AWT205 (GenBank ABX60161) all species | |||
|---|---|---|---|
| Class | NRPS-PKS (length: 2917) all classes Class 02.NRPS-PKS(NFC) in KS domain phylogeny | Reliability | putative |
| Product | GeneName | cyrB | |
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | KS-AT-DH-KR-ACP | ||
| Domain by CDD | A-PP-KS-AT-DH-ME-KR-PP | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | mixed NRPS/PKS [Cylindrospermopsis raciborskii AWT205] | ||
| Information | AA-adenyl-domain and PP domain are in front of KS. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
