PKS:Bact15

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|geneName=pyr25
 
|geneName=pyr25
 
|MAPSI=KS-AT-ACP-KS-ACP
 
|MAPSI=KS-AT-ACP-KS-ACP
|CDD=KS-AT-PP-KS-(COG3321)-PP
+
|CDD=KS-AT-PP-KS-PP
|class=PRPKS
+
|class=NRPKS
 
|reliability=putative
 
|reliability=putative
 
|description=polyketide synthase [Streptomyces vitaminophilus]
 
|description=polyketide synthase [Streptomyces vitaminophilus]
|information="Pyrrolomycin, pyr25. mPKS"
+
|information=two KS,ACP.Pyrrolomycin, pyr25. mPKS
 
|length=2167
 
|length=2167
|references=\*Schmitt.+2009$
+
|references=\*Schmitt.+2009$~\*Zhang.+2007$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 03:21, 13 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Streptomyces vitaminophilus (GenBank ABO15861) all species
Class NRPKS (length: 2167) all classes   Class in KS domain phylogeny Reliability putative
Product Pyrrolomycin GeneName pyr25
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-KS-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-KS-PP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Streptomyces vitaminophilus]
Information two KS,ACP.Pyrrolomycin, pyr25. mPKS
References
  • Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi. PLoS One 4:e4437, 2009
  • Zhang X, Parry RJ: Cloning and characterization of the pyrrolomycin biosynthetic gene clusters from actinosporangium vitaminophilum atcc 31673 and streptomyces sp. Strain uc 11065. Antimicrob Agents Chemother 51(3):946-957, 2007
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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