PKS:Aspni1:56896
From Metabolomics.JP
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|species=Aspergillus niger ATCC 1015 | |species=Aspergillus niger ATCC 1015 | ||
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella | |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella | ||
| − | |product= | + | |product=naphtho-c-pyrone/DHN-melanin |
|GenBank= | |GenBank= | ||
|UniProt= | |UniProt= | ||
| Line 9: | Line 9: | ||
|UniRef50= | |UniRef50= | ||
|geneName=albAp | |geneName=albAp | ||
| − | |MAPSI= | + | |MAPSI=KS-AT-ACP-ACP-CYC |
| − | |CDD= | + | |CDD=AT-KS-AT-PP-PP-TE |
| + | |ITERDB=KS-AT-ACP-ACP-CYC | ||
| + | |InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
|class=NRPKS | |class=NRPKS | ||
|reliability=identified | |reliability=identified | ||
|description= | |description= | ||
| − | |information= | + | |information=EHA28527.1 may be the corresponding GenBank ID of Aspni1:56896. An09g05730 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=[http://fungicyc.broadinstitute.org/ANIG1/NEW-IMAGE?type=GENE&object=G4U-9291 est_fge1_pm_C_110062] |
| − | |length= | + | |length=2153 |
| − | |references= | + | |references=\*Chiang.+2011$~\*Fisch.+2009$~\*Ahuja.+2012$ |
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 15:29, 15 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger ATCC 1015 (GenBank [1]) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2153) all classes Class in KS domain phylogeny | Reliability | identified |
| Product | naphtho-c-pyrone/DHN-melanin | GeneName | albAp |
| UniProt,UniRef90 | [2] , [3] | UniRef50 | [4] |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | AT-KS-AT-PP-PP-TE | ||
| Domain by ITER-DB | KS-AT-ACP-ACP-CYC | ||
| Estimated Domain | SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
| Description | |||
| Information | EHA28527.1 may be the corresponding GenBank ID of Aspni1:56896. An09g05730 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=est_fge1_pm_C_110062 | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
