PKS:Aspni1:56896
From Metabolomics.JP
(Difference between revisions)
| Line 11: | Line 11: | ||
|MAPSI=KS-AT-ACP-ACP-CYC | |MAPSI=KS-AT-ACP-ACP-CYC | ||
|CDD=AT-KS-AT-PP-PP-TE | |CDD=AT-KS-AT-PP-PP-TE | ||
| + | |ITERDB=KS-AT-ACP-ACP-CYC | ||
| + | |InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
|class=NRPKS | |class=NRPKS | ||
|reliability=identified | |reliability=identified | ||
|description= | |description= | ||
| − | |information=Possible GenBank ID= EHA28527.1 | + | |information=Possible GenBank ID= EHA28527.1. Possibly be classified into NRPKS. An09g05730 in A. niger CBS 513.88 is one of homologous genes. http://fungicyc.broadinstitute.org/ANIG1/NEW-IMAGE?type=GENE&object=G4U-9291 |
|length=2153 | |length=2153 | ||
| − | |references=\*Chiang.+2011$~\*Fisch.+2009$ | + | |references=\*Chiang.+2011$~\*Fisch.+2009$~\*Ahuja.+2012$ |
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Revision as of 14:15, 14 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger ATCC 1015 (GenBank [1]) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2153) all classes Class in KS domain phylogeny | Reliability | identified |
| Product | naphtho-c-pyrone/DHN-melanin | GeneName | albAp |
| UniProt,UniRef90 | [2] , [3] | UniRef50 | [4] |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | AT-KS-AT-PP-PP-TE | ||
| Domain by ITER-DB | KS-AT-ACP-ACP-CYC | ||
| Estimated Domain | SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
| Description | |||
| Information | Possible GenBank ID= EHA28527.1. Possibly be classified into NRPKS. An09g05730 in A. niger CBS 513.88 is one of homologous genes. http://fungicyc.broadinstitute.org/ANIG1/NEW-IMAGE?type=GENE&object=G4U-9291 | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
