PKS:Aspni1:190014

Latest revision as of 12:41, 16 May 2012

Aspergillus niger ATCC 1015 (GenBank EHA25844.1) all species
Class	NRPKS (length: 2517) all classes Class in KS domain phylogeny	Reliability	identified
Product		GeneName
UniProt,UniRef90	[1] , [2]	UniRef50	[3]
Domain by MAPSI	KS-AT-ACP (notation help / all patterns)
Domain by CDD	KS-AT-PP-ME-TE (notation help / all patterns)
Domain by ITER-DB	KS-AT-ACP-KR (notation help / all patterns)
Estimated Domain	SAT-KS-AT-PT-ACP-ME-R
Description
Information	An12g02050 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=e_gw1_12.326(length=2516 aa). KR domain in the end of the protein is detected by ITERDB. Aspni1:190014 is regarded as NRPKS [Ahuja, 2012].
References	Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012 Chiang YM, Meyer KM, Praseuth M, Baker SE, Bruno KS, Wang CC: Characterization of a polyketide synthase in aspergillus niger whose product is a precursor for both dihydroxynaphthalene (dhn) melanin and naphtho-gamma-pyrone. Fungal Genet Biol 48(4):430-437, 2011 Fisch KM, Gillaspy AF, Gipson M, Henrikson JC, Hoover AR, Jackson L, Najar FZ, Wagele H, Cichewicz RH: Chemical induction of silent biosynthetic pathway transcription in aspergillus niger. J Ind Microbiol Biotechnol 36(9):1199-1213, 2009
Link	AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

@@ Line 12: / Line 12: @@
 |CDD=KS-AT-PP-ME-TE
 |ITERDB=KS-AT-ACP-KR
-|InferredDomain=SAT-KS-AT-PT-ACP-CMeT-R
+|InferredDomain=SAT-KS-AT-PT-ACP-ME-R
 |class=NRPKS
 |reliability=identified