PKS:Aspe02*
From Metabolomics.JP
(Difference between revisions)
(update ITERDB and Estimated Domain inf.) |
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| Line 11: | Line 11: | ||
|MAPSI=KS-AT-ACP-ACP-CYC | |MAPSI=KS-AT-ACP-ACP-CYC | ||
|CDD=(AT)-KS-AT-PP-PP-TE | |CDD=(AT)-KS-AT-PP-PP-TE | ||
| + | |ITERDB=KS-AT-ACP-ACP-CYC | ||
| + | |InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
|class=NRPKS | |class=NRPKS | ||
|reliability=identified | |reliability=identified | ||
|description=AflC [Aspergillus ochraceoroseus] | |description=AflC [Aspergillus ochraceoroseus] | ||
| − | |information=An additional and incompleted AT | + | |information=An additional and incompleted AT is in front of KS. |
|length=2199 | |length=2199 | ||
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Cary.+2009$ | |references=\*Li.+2010$~\*Ahuja.+2012$~\*Cary.+2009$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 01:56, 7 June 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus ochraceoroseus (GenBank ACH72912) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2199) all classes Class in KS domain phylogeny | Reliability | identified |
| Product | aflatoxin | GeneName | aflC |
| UniProt,UniRef90 | B5DCI2 , B5DCI2 | UniRef50 | Q12053 |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | (AT)-KS-AT-PP-PP-TE | ||
| Domain by ITER-DB | KS-AT-ACP-ACP-CYC | ||
| Estimated Domain | SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
| Description | AflC [Aspergillus ochraceoroseus] | ||
| Information | An additional and incompleted AT is in front of KS. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
