PKS:An14g04850
From Metabolomics.JP
(Difference between revisions)
| Line 14: | Line 14: | ||
|reliability= | |reliability= | ||
|description=hypothetical protein An14g04850 [Aspergillus niger] | |description=hypothetical protein An14g04850 [Aspergillus niger] | ||
| − | |information=domain-AA-adenyl-dom and PP before KS | + | |information=Possible NRPS-PKS domain structure: AP-KS-AT-P. Domain AA-adenyl-dom and PP before KS. (Title: strong similarity to pimaricin polyketide synthase pimS2 - Streptomyces natalensis; Catalytic activity: polyketide synthases are multifunctional enzymes-containing oxidoreductase-transferase and dehydratase activity; some of the typical domains present in polyketide synthases are recognized in the predicted ORF.; Function: pimS2 of S. natalensis is involved in the biosynthesis of the polyene macrolide pimaricin-important in the food industry as a preservative to prevent mould contamination of foods.; Pathway: polyketides are generated from acetate by a pathway similar to the fatty acid metabolism-where some reduction or dehydratation reactions can be suppressed at specific biosynthetic steps-resulting in a much wider range of products-constituting a large family of often biologically active secondary metabolites.; Similarity: the predicted ORF shows strong similarity to different fungal polyketide synthases.) |
|length=1869 | |length=1869 | ||
|references=\*Pel.+2007$ | |references=\*Pel.+2007$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Revision as of 02:07, 10 April 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger CBS 513.88 (GenBank XP_001401108) all species | |||
|---|---|---|---|
| Class | NRPS-PKS (length: 1869) all classes Class 02.NRPS-PKS(NFC) in KS domain phylogeny | Reliability | |
| Product | GeneName | ||
| UniProt,UniRef90 | A2R3M8 , - | UniRef50 | - |
| Domain by MAPSI | ACP-KS-AT-ACP | ||
| Domain by CDD | LuxE-PP-KS-AT-PP | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | hypothetical protein An14g04850 [Aspergillus niger] | ||
| Information | Possible NRPS-PKS domain structure: AP-KS-AT-P. Domain AA-adenyl-dom and PP before KS. (Title: strong similarity to pimaricin polyketide synthase pimS2 - Streptomyces natalensis; Catalytic activity: polyketide synthases are multifunctional enzymes-containing oxidoreductase-transferase and dehydratase activity; some of the typical domains present in polyketide synthases are recognized in the predicted ORF.; Function: pimS2 of S. natalensis is involved in the biosynthesis of the polyene macrolide pimaricin-important in the food industry as a preservative to prevent mould contamination of foods.; Pathway: polyketides are generated from acetate by a pathway similar to the fatty acid metabolism-where some reduction or dehydratation reactions can be suppressed at specific biosynthetic steps-resulting in a much wider range of products-constituting a large family of often biologically active secondary metabolites.; Similarity: the predicted ORF shows strong similarity to different fungal polyketide synthases.) | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
