PKS:An11g04280
From Metabolomics.JP
(Difference between revisions)
| Line 10: | Line 10: | ||
|geneName= | |geneName= | ||
|MAPSI=KS-AT-DH-KR-ACP | |MAPSI=KS-AT-DH-KR-ACP | ||
| − | |CDD=KS-AT-DH- | + | |CDD=KS-AT-DH-ER-KR-PP |
|class=RPKS | |class=RPKS | ||
|reliability= | |reliability= | ||
|description=hypothetical protein An11g04280 [Aspergillus niger] | |description=hypothetical protein An11g04280 [Aspergillus niger] | ||
| − | |information=Title: strong similarity to polyketide synthase PKS1 - Cochliobolus heterostrophus; Catalytic activity: polyketide synthases are multifunctional enzymes-containing oxidoreductase-transferase and dehydratase activity.; Function: PKS1 of C. heterostrophus is required for the biosynthesis of the polyketide T-toxin.; Pathway: polyketides are generated from acetate by a pathway similar to the fatty acid metabolism-where some reduction or dehydratation reactions can be suppressed at specific biosynthetic steps-resulting in a much wider range of products-constituting a large family of often biologically active secondary metabolites.; Similarity: the predicted ORF shows strong similarity to different fungal polyketide synthases-e. g. also to lovF of A. terreus-which is linked to lovC in the A. terreus genome.? | + | |information=CCD domain structure:KS-AT-DH-MDR-KR-PP. ER is one of MDR family. CCD of ANig18 presents here as KS-AT-DH-ER-KR-PP.(Title: strong similarity to polyketide synthase PKS1 - Cochliobolus heterostrophus; Catalytic activity: polyketide synthases are multifunctional enzymes-containing oxidoreductase-transferase and dehydratase activity.; Function: PKS1 of C. heterostrophus is required for the biosynthesis of the polyketide T-toxin.; Pathway: polyketides are generated from acetate by a pathway similar to the fatty acid metabolism-where some reduction or dehydratation reactions can be suppressed at specific biosynthetic steps-resulting in a much wider range of products-constituting a large family of often biologically active secondary metabolites.; Similarity: the predicted ORF shows strong similarity to different fungal polyketide synthases-e. g. also to lovF of A. terreus-which is linked to lovC in the A. terreus genome.?) |
|length=2341 | |length=2341 | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Revision as of 00:52, 13 April 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger CBS 513.88 (GenBank XP_001394423) all species | |||
|---|---|---|---|
| Class | RPKS (length: 2341) all classes Class 43.R-PKS_X in KS domain phylogeny | Reliability | |
| Product | GeneName | ||
| UniProt,UniRef90 | - , - | UniRef50 | - |
| Domain by MAPSI | KS-AT-DH-KR-ACP | ||
| Domain by CDD | KS-AT-DH-ER-KR-PP | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | hypothetical protein An11g04280 [Aspergillus niger] | ||
| Information | CCD domain structure:KS-AT-DH-MDR-KR-PP. ER is one of MDR family. CCD of ANig18 presents here as KS-AT-DH-ER-KR-PP.(Title: strong similarity to polyketide synthase PKS1 - Cochliobolus heterostrophus; Catalytic activity: polyketide synthases are multifunctional enzymes-containing oxidoreductase-transferase and dehydratase activity.; Function: PKS1 of C. heterostrophus is required for the biosynthesis of the polyketide T-toxin.; Pathway: polyketides are generated from acetate by a pathway similar to the fatty acid metabolism-where some reduction or dehydratation reactions can be suppressed at specific biosynthetic steps-resulting in a much wider range of products-constituting a large family of often biologically active secondary metabolites.; Similarity: the predicted ORF shows strong similarity to different fungal polyketide synthases-e. g. also to lovF of A. terreus-which is linked to lovC in the A. terreus genome.?) | ||
| References | |||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
