PKS:AO090023000444
From Metabolomics.JP
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|MAPSI=KS-AT-ACP | |MAPSI=KS-AT-ACP | ||
|CDD=KS-AT | |CDD=KS-AT | ||
| + | |ITERDB=KS-AT-ACP | ||
| + | |InferredDomain=SAT-KS-AT-PT-ACP | ||
|class=NRPKS | |class=NRPKS | ||
|reliability=putative | |reliability=putative | ||
|description=hypothetical protein [Aspergillus oryzae RIB40] | |description=hypothetical protein [Aspergillus oryzae RIB40] | ||
| − | |information= | + | |information=This sequence has been updated. Previous version is XP_001820992.1 ([http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=protein&term=XP_001820992.1 XP_001820992.1], length= 1731 aa).Domain identification by CDD doesn't detect PP(ACP) domain from the sequence of AO090023000444(XP_001820992.2). Estimated Domain of AO090023000444 might be detected from XP_001820992.1. |
| − | |length= | + | |length=1535 |
| − | |references=\*Li.+2010$ | + | |references=\*Li.+2010$~\*Ahuja.+2012$ |
| + | |||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 03:09, 18 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus oryzae RIB40 (GenBank XP_001820992) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 1535) all classes Class 09.NRPKS_I(2) in KS domain phylogeny | Reliability | putative |
| Product | GeneName | ||
| UniProt,UniRef90 | - , - | UniRef50 | - |
| Domain by MAPSI | KS-AT-ACP | ||
| Domain by CDD | KS-AT | ||
| Domain by ITER-DB | KS-AT-ACP | ||
| Estimated Domain | SAT-KS-AT-PT-ACP | ||
| Description | hypothetical protein [Aspergillus oryzae RIB40] | ||
| Information | This sequence has been updated. Previous version is XP_001820992.1 (XP_001820992.1, length= 1731 aa).Domain identification by CDD doesn't detect PP(ACP) domain from the sequence of AO090023000444(XP_001820992.2). Estimated Domain of AO090023000444 might be detected from XP_001820992.1. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
