PKS:AO090020000186
From Metabolomics.JP
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|MAPSI=KS-AT-DH-ER-KR-ACP | |MAPSI=KS-AT-DH-ER-KR-ACP | ||
|CDD=KS-AT-DH-ME-ER-KR-PP | |CDD=KS-AT-DH-ME-ER-KR-PP | ||
| + | |ITERDB=KS-AT-DH-ER-KR-ACP | ||
|class=RPKS | |class=RPKS | ||
|reliability=putative | |reliability=putative | ||
|description= hypothetical protein [Aspergillus oryzae RIB40] | |description= hypothetical protein [Aspergillus oryzae RIB40] | ||
| − | |information=XP_001824541.2 is part of | + | |information=This sequence has been updated ([http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=protein&term=XP_.2 XP_001827098.2], length= 1580 aa). The updated sequence doesn't contain KS and AT domain. [http://www.ncbi.nlm.nih.gov/protein/XP_001824541.2 XP_001824541.2] is part of AO090020000186(DH-ME-ER-KR-PP). BAE63408.1 is another Genebank ID of AO090020000186. |
|length=2555 | |length=2555 | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 02:57, 18 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus oryzae RIB40 (GenBank BAE63408.1) all species | |||
|---|---|---|---|
| Class | RPKS (length: 2555) all classes Class 36.R-PKS_III in KS domain phylogeny | Reliability | putative |
| Product | GeneName | ||
| UniProt,UniRef90 | Q2U4V7 , - | UniRef50 | - |
| Domain by MAPSI | KS-AT-DH-ER-KR-ACP | ||
| Domain by CDD | KS-AT-DH-ME-ER-KR-PP | ||
| Domain by ITER-DB | KS-AT-DH-ER-KR-ACP | ||
| Estimated Domain | |||
| Description | hypothetical protein [Aspergillus oryzae RIB40] | ||
| Information | This sequence has been updated (XP_001827098.2, length= 1580 aa). The updated sequence doesn't contain KS and AT domain. XP_001824541.2 is part of AO090020000186(DH-ME-ER-KR-PP). BAE63408.1 is another Genebank ID of AO090020000186. | ||
| References | |||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
