PKS:ANid01*

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|UniRef90=Q12397
 
|UniRef90=Q12397
 
|UniRef50=Q12053
 
|UniRef50=Q12053
−
|geneName=pksST
+
|geneName=pksST(stcA)
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|CDD=KS-AT-PP-PP-TE
 
|CDD=KS-AT-PP-PP-TE

Revision as of 16:44, 10 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD) 		Domains
(by MAPSI)
Emericella nidulans (GenBank AAA81586) all species
Class NRPKS (length: 2181) all classes   Class in KS domain phylogeny Reliability putative
Product sterigmatocystin GeneName pksST(stcA)
UniProt,UniRef90 Q12397 , Q12397 UniRef50 Q12053
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Emericella nidulans]
Information sterigmatocystin. Locus=EMESTCA. AAA81586(Q12397). Putative sterigmatocystin biosynthesis polyketide synthase-Involved in the synthesis of the polyketide nucleus of sterigmatocystin from hexanoyl-CoA and seven malonates
References
  • Brown DW, Yu JH, Kelkar HS, Fernandes M, Nesbitt TC, Keller NP, Adams TH, Leonard TJ: Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in aspergillus nidulans. Proc Natl Acad Sci U S A 93(4):1418-1422, 1996
  • Fisch KM, Gillaspy AF, Gipson M, Henrikson JC, Hoover AR, Jackson L, Najar FZ, Wagele H, Cichewicz RH: Chemical induction of silent biosynthetic pathway transcription in aspergillus niger. J Ind Microbiol Biotechnol 36(9):1199-1213, 2009
  • John U, Beszteri B, Derelle E, Van de Peer Y, Read B, Moreau H, Cembella A: Novel insights into evolution of protistan polyketide synthases through phylogenomic analysis. Protist 159:21-30, 2008
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
  • Valarmathi R, Hariharan GN, Venkataraman G, Parida A: Characterization of a non-reducing polyketide synthase gene from lichen dirinaria applanata. Phytochemistry 70(6):721-729, 2009
  • Varga J, Rigo K, Kocsube S, Farkas B, Pal K: Diversity of polyketide synthase gene sequences in Aspergillus species. Res Microbiol 154:593-600, 2003
  • Yu JH, Leonard TJ: Sterigmatocystin biosynthesis in aspergillus nidulans requires a novel type i polyketide synthase. J. Bacteriol. 177(16):4792-4800, 1995
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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