PKS:AFLA 108550
From Metabolomics.JP
(Difference between revisions)
| Line 16: | Line 16: | ||
|reliability=putative | |reliability=putative | ||
|description=polyketide synthase-putative [Aspergillus flavus NRRL3357] | |description=polyketide synthase-putative [Aspergillus flavus NRRL3357] | ||
| − | |information=[http://aspgd.igs.umaryland.edu/cgi-bin/asp2_v3/shared/show_protein.cgi?site=asp2_v3&protein_name=afl.polypeptide.1670235378.1 AFL2G_04285] is a ID from AspGD. AFL2G_04285(1755 aa) has high identity/similarity (Identities 99%) to [http://www.ncbi.nlm.nih.gov/protein/XP_002376725.1 AFLA 108550] from Aspergillus flavus NRRL3357. Domain identification by CCD doesn't detect PP(ACP) domain from sequence of AFLA 108550. | + | |information=[http://aspgd.igs.umaryland.edu/cgi-bin/asp2_v3/shared/show_protein.cgi?site=asp2_v3&protein_name=afl.polypeptide.1670235378.1 AFL2G_04285] is a ID from AspGD. AFL2G_04285(1755 aa) has high identity/similarity (Identities 99%) to [http://www.ncbi.nlm.nih.gov/protein/XP_002376725.1 AFLA 108550] from Aspergillus flavus NRRL3357. Domain identification by CCD doesn't detect PP(ACP) domain from the sequence of AFLA 108550. |
|length=1751 | |length=1751 | ||
|references=\*Li.+2010$~\*Ahuja.+2012$ | |references=\*Li.+2010$~\*Ahuja.+2012$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Revision as of 13:28, 15 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus flavus NRRL3357 (GenBank XP_002376725) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 1751) all classes Class 09.NRPKS_I(2) in KS domain phylogeny | Reliability | putative |
| Product | GeneName | ||
| UniProt,UniRef90 | B8N8R0 , B8N8R0 | UniRef50 | P0C8J3 |
| Domain by MAPSI | KS-AT-ACP | ||
| Domain by CDD | KS-AT | ||
| Domain by ITER-DB | KS-AT-ACP | ||
| Estimated Domain | SAT-KS-AT-PT-ACP | ||
| Description | polyketide synthase-putative [Aspergillus flavus NRRL3357] | ||
| Information | AFL2G_04285 is a ID from AspGD. AFL2G_04285(1755 aa) has high identity/similarity (Identities 99%) to AFLA 108550 from Aspergillus flavus NRRL3357. Domain identification by CCD doesn't detect PP(ACP) domain from the sequence of AFLA 108550. | ||
| References |
| ||
| Link | 108550 AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
