Category:TP
From Metabolomics.JP
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| − | ==Design of | + | ==Design of Triterpene ID numbers ID番号の設計== |
<center> | <center> | ||
12-DIGIT | 12-DIGIT | ||
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<td style="background-color:green;" width=15px align="center"><big>T</big> | <td style="background-color:green;" width=15px align="center"><big>T</big> | ||
<td style="background-color:green;" width=15px align="center"><big>P</big> | <td style="background-color:green;" width=15px align="center"><big>P</big> | ||
| − | <td style="background-color: | + | <td style="background-color:green;" width=15px align="center"><big>3</big> |
<td style="background-color:darkseagreen;" width=15px align="center"><big>''x''</big> | <td style="background-color:darkseagreen;" width=15px align="center"><big>''x''</big> | ||
<td style="background-color:tomato;" width=15px align="center"><big>''y''</big> | <td style="background-color:tomato;" width=15px align="center"><big>''y''</big> | ||
| Line 19: | Line 19: | ||
<td style="background-color:firebrick;" width=15px align="center"><big>''r''</big> | <td style="background-color:firebrick;" width=15px align="center"><big>''r''</big> | ||
<td style="background-color:firebrick;" width=15px align="center"><big>''h''</big> | <td style="background-color:firebrick;" width=15px align="center"><big>''h''</big> | ||
| − | <td style="background-color: | + | <td style="background-color:orange;" width=15px align="center"><big>''g''</big> |
| − | <td style="background-color: | + | <td style="background-color:orange;" width=15px align="center"><big>''n''</big> |
<td style="background-color:white;" width=15px align="center"><big>''c''</big> | <td style="background-color:white;" width=15px align="center"><big>''c''</big> | ||
<td style="background-color:white;" width=15px align="center"><big>''c''</big> | <td style="background-color:white;" width=15px align="center"><big>''c''</big> | ||
| Line 28: | Line 28: | ||
; ''x'' ... species information: | ; ''x'' ... species information: | ||
{| class="wikitable" | {| class="wikitable" | ||
| − | ! | + | ! Symbol at ''x'' || Kingdom || Phyla || Examples |
|- | |- | ||
| − | | '' | + | |align="center"| '''C''' |
| + | | All | ||
| + | | [[:Category:TPC|common structures]] | ||
| + | |||
| + | | lanosterol, cholesterol | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''I''' |
| − | | | + | |rowspan="3"| Animalia |
| + | | [[:Category:TPI|Arthropoda]] (insects, crabs) | ||
| + | | ecdysteroids | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''V''' |
| + | | [[:Category:TPV|Chordate]] (vertebrates) | ||
| + | | sex steroids, corticosteroids, anabolic steroids | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''O''' |
| + | | [[:Category:TPO|others]] | ||
| + | | marine steroids | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''P''' |
| − | | | + | |rowspan="2"| Plantae |
| + | | [[:Category:TPP|phytosterols]] | ||
| + | | phytosterols, brassinolides | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''S''' |
| + | | [[:Category:TPS|saponins]] | ||
| + | | saponins | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''F''' |
| + | | Fungi | ||
| + | | [[:Category:TPF|ergosterols]] | ||
| + | | ergosterols | ||
|- | |- | ||
| − | | '' | + | |align="center"| '''B''' |
| + | | Bacteria | ||
| + | | [[:Category:TPB|bacterial sterols]] | ||
| + | | hopanoids | ||
|} | |} | ||
; ''y'' ... backbone structure (母核構造) : | ; ''y'' ... backbone structure (母核構造) : | ||
| − | {| | + | <table><tr valign="top"><td> |
| + | {| class="wikitable sortable" | ||
| + | ! Symbol at ''y'' || Carbons || Steroidal | ||
|- | |- | ||
| − | + | | ''GN'' | |
| + | | C17 || gonane | ||
|- | |- | ||
| − | + | | ''ES'' | |
| + | | C18 || estrane | ||
|- | |- | ||
| − | + | | ''AD'' | |
| + | | C19 || androstane | ||
|- | |- | ||
| − | | C21 || '' | + | | ''PG'' |
| + | | C21 || pregnane | ||
| + | |- | ||
| + | | ''CA'' | ||
| + | | C24 || cholane | ||
| + | |- | ||
| + | | ''CL'' | ||
| + | | C27 || cholestane | ||
| + | |- | ||
| + | | ''CM'' | ||
| + | | C28 || campestane | ||
| + | |- | ||
| + | | ''EG'' | ||
| + | | C28 || ergostane | ||
| + | |- | ||
| + | | ''SG'' | ||
| + | | C29 (4 rings) || stigmastane | ||
| + | |- | ||
| + | | ''PR'' | ||
| + | | C29 (4 rings) || poriferastane | ||
| + | |}</td><td> | ||
| + | {| class="wikitable sortable" | ||
| + | ! Symbol at ''y'' || Carbons || Plant-derived | ||
| + | |- | ||
| + | | ''LN'' | ||
| + | | C30 (4 rings) || lanostane | ||
| + | |- | ||
| + | | ''CY'' | ||
| + | | C30 (4 rings) ||cycloartane | ||
| + | |- | ||
| + | | ''BC'' | ||
| + | | C30 (4 rings) ||baccharane | ||
| + | |- | ||
| + | | ''CC'' | ||
| + | | C30 (4 rings) ||cucurbitane | ||
| + | |- | ||
| + | | ''DM'' | ||
| + | | C30 (4 rings) ||dammarane | ||
| + | |- | ||
| + | | ''HL'' | ||
| + | | C30 (4 rings) ||holostane | ||
|- | |- | ||
| − | + | | ''PF'' | |
| + | | C29 (5 rings) || pfaffane | ||
|- | |- | ||
| − | + | | ''HP'' | |
| + | | C30 (5 rings) || hopane | ||
|- | |- | ||
| − | + | | ''LP'' | |
| + | | C30 (5 rings) || lupane | ||
|- | |- | ||
| − | | | + | | ''OL'' |
| + | | C30 (5 rings) || oleanane | ||
|- | |- | ||
| − | | | + | | ''SR'' |
| + | | C30 (5 rings) || serratane | ||
|- | |- | ||
| − | | C30 ( | + | | ''TR'' |
| + | | C30 (5 rings) || taraxastane | ||
|- | |- | ||
| − | | C30 (5 rings) || | + | | ''UR'' |
| + | | C30 (5 rings) || ursane | ||
|} | |} | ||
| + | </td></tr></table> | ||
; ''r'' ... number of major rings (環構造数) : | ; ''r'' ... number of major rings (環構造数) : | ||
Revision as of 09:17, 21 July 2010
Triterpenes
Triterpenes are synthesized from squalene, which is formed by tail-to-tail conjugation of two farnesyl biphosphates (FPP), formed from mevalonate.
Design of Triterpene ID numbers ID番号の設計
12-DIGIT
| T | P | 3 | x | y | y | r | h | g | n | c | c |
- x ... species information
| Symbol at x | Kingdom | Phyla | Examples |
|---|---|---|---|
| C | All | common structures | lanosterol, cholesterol |
| I | Animalia | Arthropoda (insects, crabs) | ecdysteroids |
| V | Chordate (vertebrates) | sex steroids, corticosteroids, anabolic steroids | |
| O | others | marine steroids | |
| P | Plantae | phytosterols | phytosterols, brassinolides |
| S | saponins | saponins | |
| F | Fungi | ergosterols | ergosterols |
| B | Bacteria | bacterial sterols | hopanoids |
- y ... backbone structure (母核構造)
|
|
- r ... number of major rings (環構造数)
Click above categories to see details.
- h ... hydroxylation pattern (水酸基数)
Click above categories to see details.
- g ... glycosylation pattern(糖修飾パターン)
Click above categories to see details.
- n ... number of sugars (修飾糖数)
Click above categories to see details.
- c ... serial number (通し番号)
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