User:Aritalab/UTRIP

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(Created page with "==For Applicants== If you want to study in my laboratory, please do apply. My laboratory do not filter out applicants. '''Important notice:''' My laboratory does NOT have ex...")
 
 
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* Metabolic network of Archaea
 
* Metabolic network of Archaea
 
* Metabolic network of sequenced species
 
* Metabolic network of sequenced species
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;Related articles
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[http://www.biomedcentral.com/1471-2105/12/S1/S27/abstract CW Chang, PC Lyu, M Arita (2011) ''BMC Bioinformatics'' 12:S27]
  
 
===Mass Spectra===
 
===Mass Spectra===
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;For experts
 
;For experts
 
* Statistical assessment of spectral matching
 
* Statistical assessment of spectral matching
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;Related articles
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[http://onlinelibrary.wiley.com/doi/10.1002/jms.1777/abstract Horai et al. (2011) ''J Mass Spectrom'' 45:703-714]
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[http://secure3.computer.org/csdl/proceedings/bmei/2008/3118/02/3118b853-abs.html H Horai, M Arita, T Nishioka ''BMEI 2008'']

Latest revision as of 00:12, 15 March 2012

Contents

[edit] For Applicants

If you want to study in my laboratory, please do apply. My laboratory do not filter out applicants.

Important notice: My laboratory does NOT have experimental facility, only computers. If you want to do biological experiments, please do not apply for my lab.

[edit] Schedule

My laboratory accepts students in the 1st Crew (6/18-7/27). The official schedule of the UTRIP is here.

6/18 opening ceremony (I have a lecture for 13:00-15:00, but can join the event after that.)
6/19 campus tour
6/20-26 Lab work (I will be away for the latter half for a meeting in Indonesia.)
6/25-29 Lab work (Again I am away for a meeting in Washington DC.)
7/2-6 Lab work
7/9-13 Lab work
7/17-20 Lab work (The 18th is a national holiday here.)
7/23-25 Lab work
7/26 10 minutes presentation
7/27 closing ceremony

[edit] Research Topics

Following topics are not mandatory. If you prefer to bring in your own project, we are open to discuss.

[edit] Network Analysis

  • Metabolic network of Archaea
  • Metabolic network of sequenced species
Related articles

CW Chang, PC Lyu, M Arita (2011) BMC Bioinformatics 12:S27

[edit] Mass Spectra

For programming beginners
  • Design of spectral matching algorithm
For experts
  • Statistical assessment of spectral matching
Related articles

Horai et al. (2011) J Mass Spectrom 45:703-714

H Horai, M Arita, T Nishioka BMEI 2008

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