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'''MediaWiki has been successfully installed.'''
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Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software.
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[[User:Aritalab|{{Bilingual|東京大学・有田研究室は、国立遺伝学研究所に異動しました。|Arita Laboratory has moved to National Institute of Genetics.}}]] [[Help:Contents|More...]]
  
== Getting started ==
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* [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list]
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==Contents==
* [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ]
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* [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list]
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{| style="background-color:transparent;width:100%;border-style:none;border-collapse:collapse"
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|-
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|style="width:45%;vertical-align:top;padding-left:0.2em" |
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===<span style="border-bottom:3px solid #060">{{Bilingual|フラボノイド データベース|Flavonoid Database}}</span>===
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|-
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| [[Image:Leaf.jpg]]
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Flavonoids such as catechin, anthocyanin, flavan are important for our health ({{#countTitle:FL|}} data now).
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* [[:Category:FL|{{bilingual|トップ|Flavonoid top}}]]
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* [[Index:FL    |{{bilingual|索引|Index by name/weight/formula}}]]
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* [[Index:Journal_Titles|{{bilingual|ジャーナル|Journals reporting flavonoid}}]]
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(compilation with [http://kanaya.naist.jp/KNApSAcK/ NAIST])
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|style="width:45%;vertical-align:top;padding-left:0.2em" |
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===<span style="border-bottom:3px solid #a00">{{Bilingual|基礎代謝物|Basic Metabolites}}</span>===
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<p>
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{{Bilingual
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|基礎代謝物とは、有機酸、アミノ酸、核酸、その他生命に必要な代謝物を意味します。 ({{#countTitle:BM|}} 物質)
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|Basic metabolites include organic and amino acids, DNAs, and other essential metabolites ({{#countTitle:BM|}} data now).}}
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* [[:Category:BM|{{bilingual|トップ|BM top}}]]
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<!---
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* [[Index:BM|{{bilingual|索引|Index by weight/formula}}]]
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--->
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</p>
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| style="vartical-align:top" |
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<small>(not ready. will be organized soon)</small>
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<h2 style="font-size:100%;text-align:left;border-bottom:3px solid #630;margin:0.2em;padding:0.2em">[[Index:PS|{{Large|P}}<big>lants</big>]] {{bilingual|植物 データベース|}}</h2>
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| [[Image:Flower.jpg]]
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<p>
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* [[Index:PS|{{bilingual|トップ|Plants top}}]]
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* [[Index:PlantSpecies/Order|{{bilingual|目名一覧|Plant orders}}]]
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* [[Persist:PlantFamilyList|{{bilingual|科名一覧|Plant families}}]]
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* {{bilingual|植物の情報(現在{{#countTitle:.*|Species}}属)はアドレスに[[Species:Arabidopsis]] のように属名を入れてください。|For each genus ({{#countTitle:.*|Species}} genera now), input a genus name as in [[Species:Arabidopsis]].}}
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</p>
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<h2 style="font-size:100%;text-align:left;border-bottom:3px solid #630;margin:0.2em;padding:0.2em">[[:Category:CD|{{Large|C}}<big>rude</big> {{Large|D}}<big>rug/Kampo</big>]] {{bilingual|漢方・生薬 データベース|}}</h2>
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| [[Image:Crudedrug.jpg|50px]]
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<p>
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* [[:Category:CD|{{bilingual|トップ|Crude Drug top}}]]
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* [[Index:CD|{{bilingual|総索引|General index}}]]
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* [[Persist:CrudeDrugList|{{bilingual|生薬一覧|Crude Drug index}}]]
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* [[Persist:KampoList|{{bilingual|処方一覧|Prescription index}}]]
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* [[Persist:KampoReference|{{bilingual|文献一覧|Kampo books}}]]
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(with [http://kanaya.naist.jp/KNApSAcK/ NAIST] & [http://www.inm.u-toyama.ac.jp/index-j.html Toyama Univ.])
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</p>
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<h2 style="font-size:100%;text-align:left;border-bottom:3px solid #CC6600;margin:0.2em;padding:0.2em">{{Large|L}}<big>inks</big></h2>
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<div style="padding:0.1em 0em;margin:0.1em 0em">
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'''Allied DB''' : [http://kanaya.naist.jp/KNApSAcK/KNApSAcK.php KNApSAcK] : [http://massbank.jp/ MassBank] : [http://lipidbank.jp/ LipidBank]
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</div>
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<div style="border-top:1px dashed steelblue;padding:0.1em 0em;margin:0.1em 0em">
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'''Spectral DB''' : [http://www.hmdb.ca/ HMDB] : [http://webbook.nist.gov/ NIST Chemistry WebBook] : [http://www.nist.gov/srd/nist1a.htm NIST Library search program] : [http://www.aist.go.jp/RIODB/SDBS/cgi-bin/cre_index.cgi SDBS] : [http://www.spectroscopynow.com/ SpectroscopyNow] : [http://cds.dl.ac.uk/cds/cds.shtml UK Chemical DB Service] : [http://www.bmrb.wisc.edu/metabolomics/ Univ Wisconsin BioMagResBank] : [http://www.ualberta.ca/~gjones/mslib.htm Univ. Alberta MS library] : [http://www.ccrc.uga.edu/specdb/specdbframe.html Univ. Georgia Complex Carbohydrate DB] : [http://www.chempensoftware.com/organicreactions.htm Univ. Pennsylvania ChemPen Project]
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</div>
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<div style="border-top:1px dashed steelblue;padding:0.1em 0em;margin:0.1em 0em">
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'''Chemical DB''' : [http://chemfinder.cambridgesoft.com/ ChemFinder] : [http://www.mdli.com/downloads/public/ctfile/ctfile.jsp CTFile format] : [http://www.daylight.com/release/f_manuals.html Daylight Documentation] : [http://chemdat.merck.de/mda/int_en/catalog/ Merck online catalog] : [http://cactus.nci.nih.gov/services/ NCI database] : [http://pubchem.ncbi.nlm.nih.gov/ PubChem] : [http://blaster.docking.org/zinc/ ZINC]
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</div>
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<div style="border-top:1px dashed steelblue;padding:0.1em 0em;margin:0.1em 0em"> '''Pathway DB''' : [http://www.biocarta.com/genes/index.asp BioCarta] : [http://www.expasy.org/tools/pathways/ Biochemical Pathways] : [http://biocyc.org/ BioCyc] : [http://www.genome.ad.jp/kegg/ KEGG] : [http://umbbd.ahc.umn.edu/ Univ. Minnesota BBD] : [http://kpv.kazusa.or.jp/kappa-view/ KaPPA-View] : [http://gabi.rzpd.de/projects/MapMan/ MapMan] : [http://www.arabidopsis.org/ TAIR]
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</div>
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<div style="border-top:1px dashed steelblue;padding:0.1em 0em;margin:0.1em 0em">
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'''Natural Compound DB''' : [http://www.au-techno.com/tennen/ AU techno-service Co.] : [http://www2.odn.ne.jp/~had26900/constituents/chemcon_dict.htm Encyclopaedia of Plant Metabolites] : [http://pherobase.com/ Pherobase]
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</div>
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<div style="border-top:1px dashed steelblue;padding:0.1em 0em;margin:0.1em 0em">
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'''Genome DB''' : [http://mbgd.genome.ad.jp/ MBGD: Microbial Genome Database] : [http://ecoli.naist.jp/GB6/search.jsp Genobase] : [http://www.sgn.cornell.edu/solanaceae-project/ Sol genomics network]
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</div>
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Latest revision as of 17:09, 13 March 2014


Arita Laboratory has moved to National Institute of Genetics. More...


[edit] Contents

[edit] Flavonoid Database

Leaf.jpg

Flavonoids such as catechin, anthocyanin, flavan are important for our health (6961 data now).

(compilation with NAIST)

[edit] Basic Metabolites

Basic metabolites include organic and amino acids, DNAs, and other essential metabolites (1948 data now).

(not ready. will be organized soon)


Plants

Flower.jpg

Crude Drug/Kampo

Crudedrug.jpg

(with NAIST & Toyama Univ.)


Links

Allied DB : KNApSAcK : MassBank : LipidBank

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